Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL355472.2-201ENST00000422958 438 ntBASIC19.83■□□□□ 0.77
PKP4Q99569 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.83■□□□□ 0.77
PKP4Q99569 AC006970.2-201ENST00000450065 779 ntBASIC19.83■□□□□ 0.77
PKP4Q99569 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.83■□□□□ 0.77
PKP4Q99569 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP4Q99569 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PKP4Q99569 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PKP4Q99569 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.83■□□□□ 0.76
PKP4Q99569 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.83■□□□□ 0.76
PKP4Q99569 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP4Q99569 AC010980.2-201ENST00000587099 1412 ntBASIC19.83■□□□□ 0.76
PKP4Q99569 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.83■□□□□ 0.76
PKP4Q99569 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
PKP4Q99569 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP4Q99569 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP4Q99569 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP4Q99569 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP4Q99569 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP4Q99569 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP4Q99569 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PKP4Q99569 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP4Q99569 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP4Q99569 AL512625.2-201ENST00000417533 625 ntBASIC19.82■□□□□ 0.76
PKP4Q99569 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP4Q99569 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.82■□□□□ 0.76
PKP4Q99569 AC105036.2-201ENST00000569468 176 ntBASIC19.82■□□□□ 0.76
PKP4Q99569 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP4Q99569 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PKP4Q99569 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PKP4Q99569 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PKP4Q99569 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 AP005212.1-201ENST00000581547 1997 ntBASIC19.81■□□□□ 0.76
PKP4Q99569 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.81■□□□□ 0.76
PKP4Q99569 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP4Q99569 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP4Q99569 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 AF201337.1-201ENST00000520239 748 ntBASIC19.81■□□□□ 0.76
PKP4Q99569 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP4Q99569 CYP2T3P-201ENST00000601990 817 ntBASIC19.81■□□□□ 0.76
PKP4Q99569 AL356652.1-201ENST00000615962 565 ntBASIC19.81■□□□□ 0.76
PKP4Q99569 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP4Q99569 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
PKP4Q99569 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PKP4Q99569 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.8■□□□□ 0.76
PKP4Q99569 PGM5P4-201ENST00000421970 445 ntBASIC19.8■□□□□ 0.76
PKP4Q99569 AC090192.1-201ENST00000517740 490 ntBASIC19.8■□□□□ 0.76
PKP4Q99569 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PKP4Q99569 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PKP4Q99569 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP4Q99569 AC092667.1-201ENST00000434301 2586 ntBASIC19.8■□□□□ 0.76
PKP4Q99569 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP4Q99569 LINC01006-201ENST00000333319 2292 ntBASIC19.79■□□□□ 0.76
PKP4Q99569 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP4Q99569 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PKP4Q99569 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PKP4Q99569 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP4Q99569 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP4Q99569 KRT18P68-201ENST00000392293 1000 ntBASIC19.79■□□□□ 0.76
PKP4Q99569 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.79■□□□□ 0.76
PKP4Q99569 AC083906.2-201ENST00000511578 360 ntBASIC19.79■□□□□ 0.76
PKP4Q99569 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.79■□□□□ 0.76
PKP4Q99569 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.79■□□□□ 0.76
PKP4Q99569 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.79■□□□□ 0.76
PKP4Q99569 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.79■□□□□ 0.76
PKP4Q99569 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.79■□□□□ 0.76
PKP4Q99569 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.79■□□□□ 0.76
PKP4Q99569 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PKP4Q99569 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.79■□□□□ 0.76
PKP4Q99569 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PKP4Q99569 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
PKP4Q99569 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PKP4Q99569 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PKP4Q99569 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
PKP4Q99569 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 AC020907.5-201ENST00000624372 1936 ntBASIC19.78■□□□□ 0.76
PKP4Q99569 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms