Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 AC145285.6-201ENST00000604632 637 ntBASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
NECTIN4Q96NY8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
NECTIN4Q96NY8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 AC080038.3-201ENST00000623346 1952 ntBASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 AC005363.2-201ENST00000618631 242 ntBASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NECTIN4Q96NY8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NECTIN4Q96NY8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 AC073195.1-201ENST00000607241 877 ntBASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NECTIN4Q96NY8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NECTIN4Q96NY8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NECTIN4Q96NY8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NECTIN4Q96NY8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NECTIN4Q96NY8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
NECTIN4Q96NY8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NECTIN4Q96NY8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NECTIN4Q96NY8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 NBPF21P-201ENST00000425093 1451 ntBASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 FAM197Y1-201ENST00000421178 764 ntBASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 MIR6786-201ENST00000616843 113 ntBASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NECTIN4Q96NY8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NECTIN4Q96NY8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms