Protein–RNA interactions for Protein: Q96L94

SNX22, Sorting nexin-22, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22Q96L94 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.13■□□□□ 0.33
SNX22Q96L94 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX22Q96L94 AC007322.4-201ENST00000509611 723 ntBASIC17.13■□□□□ 0.33
SNX22Q96L94 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX22Q96L94 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX22Q96L94 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SNX22Q96L94 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX22Q96L94 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SNX22Q96L94 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SNX22Q96L94 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX22Q96L94 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX22Q96L94 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX22Q96L94 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 MFSD11-216ENST00000590393 1141 ntBASIC17.12■□□□□ 0.33
SNX22Q96L94 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.12■□□□□ 0.33
SNX22Q96L94 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNX22Q96L94 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX22Q96L94 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 FEM1AP1-201ENST00000431297 1995 ntBASIC17.11■□□□□ 0.33
SNX22Q96L94 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 AL162412.1-201ENST00000567129 965 ntBASIC17.11■□□□□ 0.33
SNX22Q96L94 AC022517.1-201ENST00000592429 346 ntBASIC17.11■□□□□ 0.33
SNX22Q96L94 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SNX22Q96L94 AC011767.1-201ENST00000617410 1153 ntBASIC17.11■□□□□ 0.33
SNX22Q96L94 BID-214ENST00000617586 542 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX22Q96L94 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX22Q96L94 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX22Q96L94 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX22Q96L94 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNX22Q96L94 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX22Q96L94 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.1■□□□□ 0.33
SNX22Q96L94 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.1■□□□□ 0.33
SNX22Q96L94 FAM21FP-204ENST00000608637 956 ntBASIC17.1■□□□□ 0.33
SNX22Q96L94 MIR2861-201ENST00000636310 90 ntBASIC17.1■□□□□ 0.33
SNX22Q96L94 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNX22Q96L94 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX22Q96L94 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SNX22Q96L94 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX22Q96L94 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX22Q96L94 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SNX22Q96L94 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX22Q96L94 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SNX22Q96L94 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX22Q96L94 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX22Q96L94 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX22Q96L94 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.09■□□□□ 0.33
SNX22Q96L94 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms