Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 AC233263.1-201ENST00000578059 224 ntBASIC21.67■■□□□ 1.06
SUSD3Q96L08 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SUSD3Q96L08 AC069544.1-201ENST00000609399 999 ntBASIC21.67■■□□□ 1.06
SUSD3Q96L08 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SUSD3Q96L08 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUSD3Q96L08 AC079834.2-201ENST00000609776 1949 ntBASIC21.67■■□□□ 1.06
SUSD3Q96L08 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
SUSD3Q96L08 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUSD3Q96L08 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.66■■□□□ 1.06
SUSD3Q96L08 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.66■■□□□ 1.06
SUSD3Q96L08 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.66■■□□□ 1.06
SUSD3Q96L08 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUSD3Q96L08 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUSD3Q96L08 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SUSD3Q96L08 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.66■■□□□ 1.06
SUSD3Q96L08 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SUSD3Q96L08 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SUSD3Q96L08 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SUSD3Q96L08 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUSD3Q96L08 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUSD3Q96L08 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUSD3Q96L08 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUSD3Q96L08 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUSD3Q96L08 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 RN7SL471P-201ENST00000580476 299 ntBASIC21.65■■□□□ 1.06
SUSD3Q96L08 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUSD3Q96L08 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.65■■□□□ 1.06
SUSD3Q96L08 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SUSD3Q96L08 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.64■■□□□ 1.06
SUSD3Q96L08 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SUSD3Q96L08 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.64■■□□□ 1.06
SUSD3Q96L08 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.64■■□□□ 1.06
SUSD3Q96L08 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
SUSD3Q96L08 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.64■■□□□ 1.06
SUSD3Q96L08 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SUSD3Q96L08 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUSD3Q96L08 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
SUSD3Q96L08 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUSD3Q96L08 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
SUSD3Q96L08 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUSD3Q96L08 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SUSD3Q96L08 AC120498.8-201ENST00000614275 531 ntBASIC21.64■■□□□ 1.05
SUSD3Q96L08 AL359736.2-201ENST00000621992 437 ntBASIC21.64■■□□□ 1.05
SUSD3Q96L08 AC006557.6-201ENST00000623071 864 ntBASIC21.64■■□□□ 1.05
SUSD3Q96L08 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUSD3Q96L08 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUSD3Q96L08 AF106564.1-201ENST00000607058 2553 ntBASIC21.64■■□□□ 1.05
SUSD3Q96L08 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUSD3Q96L08 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SUSD3Q96L08 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUSD3Q96L08 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.63■■□□□ 1.05
SUSD3Q96L08 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 PLK5-205ENST00000642079 1969 ntBASIC21.63■■□□□ 1.05
SUSD3Q96L08 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 AL390719.1-204ENST00000412397 1219 ntBASIC21.63■■□□□ 1.05
SUSD3Q96L08 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.63■■□□□ 1.05
SUSD3Q96L08 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SUSD3Q96L08 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SUSD3Q96L08 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.63■■□□□ 1.05
SUSD3Q96L08 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUSD3Q96L08 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SUSD3Q96L08 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SUSD3Q96L08 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.62■■□□□ 1.05
SUSD3Q96L08 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SUSD3Q96L08 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 AP006294.2-201ENST00000641667 209 ntBASIC21.62■■□□□ 1.05
SUSD3Q96L08 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.62■■□□□ 1.05
SUSD3Q96L08 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms