Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.37■□□□□ 0.69
ITCHQ96J02 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
ITCHQ96J02 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITCHQ96J02 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.36■□□□□ 0.69
ITCHQ96J02 IRS3P-201ENST00000223076 1006 ntBASIC19.36■□□□□ 0.69
ITCHQ96J02 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITCHQ96J02 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ITCHQ96J02 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITCHQ96J02 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.36■□□□□ 0.69
ITCHQ96J02 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.36■□□□□ 0.69
ITCHQ96J02 AL139246.5-201ENST00000606645 996 ntBASIC19.36■□□□□ 0.69
ITCHQ96J02 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.36■□□□□ 0.69
ITCHQ96J02 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ITCHQ96J02 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITCHQ96J02 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITCHQ96J02 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITCHQ96J02 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITCHQ96J02 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
ITCHQ96J02 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ITCHQ96J02 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.35■□□□□ 0.69
ITCHQ96J02 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.35■□□□□ 0.69
ITCHQ96J02 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
ITCHQ96J02 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.35■□□□□ 0.69
ITCHQ96J02 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.35■□□□□ 0.69
ITCHQ96J02 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ITCHQ96J02 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITCHQ96J02 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.34■□□□□ 0.69
ITCHQ96J02 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ITCHQ96J02 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.34■□□□□ 0.69
ITCHQ96J02 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITCHQ96J02 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4L2-201ENST00000561772 1275 ntBASIC19.34■□□□□ 0.69
ITCHQ96J02 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4L6-201ENST00000626483 1275 ntBASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4L1-201ENST00000627662 1275 ntBASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4L8-201ENST00000629013 1275 ntBASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4L3-201ENST00000630187 1275 ntBASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4L7-201ENST00000630678 1275 ntBASIC19.34■□□□□ 0.69
ITCHQ96J02 DUX4L5-201ENST00000630834 1275 ntBASIC19.34■□□□□ 0.69
ITCHQ96J02 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITCHQ96J02 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ITCHQ96J02 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITCHQ96J02 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.34■□□□□ 0.69
ITCHQ96J02 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITCHQ96J02 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.34■□□□□ 0.69
ITCHQ96J02 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.34■□□□□ 0.69
ITCHQ96J02 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITCHQ96J02 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ITCHQ96J02 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITCHQ96J02 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.33■□□□□ 0.69
ITCHQ96J02 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITCHQ96J02 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITCHQ96J02 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITCHQ96J02 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITCHQ96J02 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITCHQ96J02 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.33■□□□□ 0.68
ITCHQ96J02 AC027612.3-201ENST00000413684 1047 ntBASIC19.33■□□□□ 0.68
ITCHQ96J02 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.33■□□□□ 0.68
ITCHQ96J02 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITCHQ96J02 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITCHQ96J02 TCF3P1-201ENST00000423021 1937 ntBASIC19.33■□□□□ 0.68
ITCHQ96J02 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITCHQ96J02 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ITCHQ96J02 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.32■□□□□ 0.68
ITCHQ96J02 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
ITCHQ96J02 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.32■□□□□ 0.68
ITCHQ96J02 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ITCHQ96J02 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ITCHQ96J02 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.32■□□□□ 0.68
ITCHQ96J02 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.32■□□□□ 0.68
ITCHQ96J02 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.32■□□□□ 0.68
ITCHQ96J02 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.32■□□□□ 0.68
ITCHQ96J02 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.32■□□□□ 0.68
ITCHQ96J02 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.32■□□□□ 0.68
ITCHQ96J02 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITCHQ96J02 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.32■□□□□ 0.68
ITCHQ96J02 LINC02228-203ENST00000641970 1355 ntBASIC19.32■□□□□ 0.68
ITCHQ96J02 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms