Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SHDQ96IW2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.69■□□□□ 0.9
SHDQ96IW2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.69■□□□□ 0.9
SHDQ96IW2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.69■□□□□ 0.9
SHDQ96IW2 AC004264.1-201ENST00000608354 794 ntBASIC20.69■□□□□ 0.9
SHDQ96IW2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.69■□□□□ 0.9
SHDQ96IW2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
SHDQ96IW2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.68■□□□□ 0.9
SHDQ96IW2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHDQ96IW2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHDQ96IW2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHDQ96IW2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHDQ96IW2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.68■□□□□ 0.9
SHDQ96IW2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.68■□□□□ 0.9
SHDQ96IW2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.68■□□□□ 0.9
SHDQ96IW2 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.68■□□□□ 0.9
SHDQ96IW2 AC080038.3-201ENST00000623346 1952 ntBASIC20.68■□□□□ 0.9
SHDQ96IW2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SHDQ96IW2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHDQ96IW2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHDQ96IW2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHDQ96IW2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHDQ96IW2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.67■□□□□ 0.9
SHDQ96IW2 AC005521.1-201ENST00000393351 872 ntBASIC20.67■□□□□ 0.9
SHDQ96IW2 RBM17P1-201ENST00000453646 1190 ntBASIC20.67■□□□□ 0.9
SHDQ96IW2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.67■□□□□ 0.9
SHDQ96IW2 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.67■□□□□ 0.9
SHDQ96IW2 NUDT16P1-203ENST00000513809 620 ntBASIC20.67■□□□□ 0.9
SHDQ96IW2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.67■□□□□ 0.9
SHDQ96IW2 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.67■□□□□ 0.9
SHDQ96IW2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.67■□□□□ 0.9
SHDQ96IW2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHDQ96IW2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHDQ96IW2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHDQ96IW2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.67■□□□□ 0.9
SHDQ96IW2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SHDQ96IW2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SHDQ96IW2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHDQ96IW2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.66■□□□□ 0.9
SHDQ96IW2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.66■□□□□ 0.9
SHDQ96IW2 AP002982.1-201ENST00000492365 877 ntBASIC20.66■□□□□ 0.9
SHDQ96IW2 AC023632.3-201ENST00000521633 145 ntBASIC20.66■□□□□ 0.9
SHDQ96IW2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHDQ96IW2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHDQ96IW2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.66■□□□□ 0.9
SHDQ96IW2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.66■□□□□ 0.9
SHDQ96IW2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHDQ96IW2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHDQ96IW2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SHDQ96IW2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHDQ96IW2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SHDQ96IW2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 LINC01568-207ENST00000641790 1380 ntBASIC20.65■□□□□ 0.9
SHDQ96IW2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
SHDQ96IW2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.65■□□□□ 0.9
SHDQ96IW2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.65■□□□□ 0.9
SHDQ96IW2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.65■□□□□ 0.9
SHDQ96IW2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.65■□□□□ 0.9
SHDQ96IW2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.65■□□□□ 0.9
SHDQ96IW2 AL031963.3-201ENST00000606441 850 ntBASIC20.65■□□□□ 0.9
SHDQ96IW2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SHDQ96IW2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHDQ96IW2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.65■□□□□ 0.9
SHDQ96IW2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.65■□□□□ 0.9
SHDQ96IW2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHDQ96IW2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHDQ96IW2 KRT18P22-201ENST00000402024 1347 ntBASIC20.64■□□□□ 0.89
SHDQ96IW2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHDQ96IW2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHDQ96IW2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHDQ96IW2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.64■□□□□ 0.89
SHDQ96IW2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHDQ96IW2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.64■□□□□ 0.89
SHDQ96IW2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SHDQ96IW2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHDQ96IW2 AC113347.1-201ENST00000413321 391 ntBASIC20.64■□□□□ 0.89
SHDQ96IW2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.64■□□□□ 0.89
SHDQ96IW2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.64■□□□□ 0.89
SHDQ96IW2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.64■□□□□ 0.89
SHDQ96IW2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.64■□□□□ 0.89
SHDQ96IW2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHDQ96IW2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.64■□□□□ 0.89
SHDQ96IW2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.64■□□□□ 0.89
SHDQ96IW2 AL121906.2-201ENST00000621597 723 ntBASIC20.64■□□□□ 0.89
SHDQ96IW2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHDQ96IW2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms