Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTP4Q96DX8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTP4Q96DX8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTP4Q96DX8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.8■□□□□ 0.92
RTP4Q96DX8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.8■□□□□ 0.92
RTP4Q96DX8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTP4Q96DX8 AC006015.1-201ENST00000429970 570 ntBASIC20.8■□□□□ 0.92
RTP4Q96DX8 AC010536.3-201ENST00000620306 533 ntBASIC20.8■□□□□ 0.92
RTP4Q96DX8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTP4Q96DX8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.8■□□□□ 0.92
RTP4Q96DX8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RTP4Q96DX8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.79■□□□□ 0.92
RTP4Q96DX8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTP4Q96DX8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTP4Q96DX8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.79■□□□□ 0.92
RTP4Q96DX8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.79■□□□□ 0.92
RTP4Q96DX8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTP4Q96DX8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTP4Q96DX8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.79■□□□□ 0.92
RTP4Q96DX8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.79■□□□□ 0.92
RTP4Q96DX8 TERF1P5-201ENST00000477545 1207 ntBASIC20.79■□□□□ 0.92
RTP4Q96DX8 AL162412.1-201ENST00000567129 965 ntBASIC20.79■□□□□ 0.92
RTP4Q96DX8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTP4Q96DX8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTP4Q96DX8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RTP4Q96DX8 SMG8-203ENST00000578922 2178 ntBASIC20.79■□□□□ 0.92
RTP4Q96DX8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.79■□□□□ 0.92
RTP4Q96DX8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 AC016769.1-201ENST00000409132 1010 ntBASIC20.78■□□□□ 0.92
RTP4Q96DX8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 AC007322.4-201ENST00000509611 723 ntBASIC20.78■□□□□ 0.92
RTP4Q96DX8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 AC137761.2-201ENST00000561729 223 ntBASIC20.78■□□□□ 0.92
RTP4Q96DX8 AC145350.3-201ENST00000569033 163 ntBASIC20.78■□□□□ 0.92
RTP4Q96DX8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTP4Q96DX8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RTP4Q96DX8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTP4Q96DX8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTP4Q96DX8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
RTP4Q96DX8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTP4Q96DX8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RTP4Q96DX8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTP4Q96DX8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RTP4Q96DX8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RTP4Q96DX8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RTP4Q96DX8 AL591742.1-201ENST00000604433 565 ntBASIC20.77■□□□□ 0.92
RTP4Q96DX8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RTP4Q96DX8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTP4Q96DX8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RTP4Q96DX8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 AC080038.1-201ENST00000611274 1154 ntBASIC20.76■□□□□ 0.91
RTP4Q96DX8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 AC087633.2-202ENST00000565166 1439 ntBASIC20.76■□□□□ 0.91
RTP4Q96DX8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RTP4Q96DX8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTP4Q96DX8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTP4Q96DX8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.75■□□□□ 0.91
RTP4Q96DX8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms