Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 CD99P1-205ENST00000527459 561 ntBASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 HLA-B-256ENST00000639848 1089 ntBASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ECHDC3Q96DC8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.4■□□□□ 0.86
ECHDC3Q96DC8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC3Q96DC8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC3Q96DC8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
ECHDC3Q96DC8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC3Q96DC8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ECHDC3Q96DC8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC3Q96DC8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 AC060766.5-201ENST00000590539 871 ntBASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC3Q96DC8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC3Q96DC8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 RNA5SP413-201ENST00000516373 109 ntBASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.36■□□□□ 0.85
ECHDC3Q96DC8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ECHDC3Q96DC8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms