Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 TCF3P1-201ENST00000423021 1937 ntBASIC19.53■□□□□ 0.72
VPS33AQ96AX1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 AC091305.1-201ENST00000479476 895 ntBASIC19.53■□□□□ 0.72
VPS33AQ96AX1 AC008175.2-201ENST00000612840 297 ntBASIC19.53■□□□□ 0.72
VPS33AQ96AX1 AL136967.2-201ENST00000623968 743 ntBASIC19.53■□□□□ 0.72
VPS33AQ96AX1 RARRES2P11-201ENST00000635158 484 ntBASIC19.53■□□□□ 0.72
VPS33AQ96AX1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS33AQ96AX1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.52■□□□□ 0.72
VPS33AQ96AX1 POU5F1P4-201ENST00000413175 1085 ntBASIC19.52■□□□□ 0.72
VPS33AQ96AX1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS33AQ96AX1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
VPS33AQ96AX1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 SMG8-203ENST00000578922 2178 ntBASIC19.51■□□□□ 0.71
VPS33AQ96AX1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VPS33AQ96AX1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VPS33AQ96AX1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 AL354811.1-201ENST00000610286 706 ntBASIC19.49■□□□□ 0.71
VPS33AQ96AX1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VPS33AQ96AX1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms