Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 CDV3P1-201ENST00000471403 739 ntBASIC18.75■□□□□ 0.59
CNOT9Q92600 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT9Q92600 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT9Q92600 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CNOT9Q92600 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNOT9Q92600 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.74■□□□□ 0.59
CNOT9Q92600 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT9Q92600 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT9Q92600 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT9Q92600 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.74■□□□□ 0.59
CNOT9Q92600 AL591742.1-201ENST00000604433 565 ntBASIC18.74■□□□□ 0.59
CNOT9Q92600 AC011767.1-201ENST00000617410 1153 ntBASIC18.74■□□□□ 0.59
CNOT9Q92600 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CNOT9Q92600 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNOT9Q92600 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT9Q92600 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT9Q92600 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CNOT9Q92600 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.73■□□□□ 0.59
CNOT9Q92600 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
CNOT9Q92600 AC092720.2-201ENST00000602388 1665 ntBASIC18.73■□□□□ 0.59
CNOT9Q92600 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CNOT9Q92600 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 AL512408.1-201ENST00000569378 2000 ntBASIC18.73■□□□□ 0.59
CNOT9Q92600 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNOT9Q92600 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.73■□□□□ 0.59
CNOT9Q92600 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CNOT9Q92600 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CNOT9Q92600 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNOT9Q92600 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNOT9Q92600 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.73■□□□□ 0.59
CNOT9Q92600 AC006015.1-201ENST00000429970 570 ntBASIC18.73■□□□□ 0.59
CNOT9Q92600 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CNOT9Q92600 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CNOT9Q92600 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.73■□□□□ 0.59
CNOT9Q92600 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CNOT9Q92600 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT9Q92600 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CNOT9Q92600 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT9Q92600 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.72■□□□□ 0.59
CNOT9Q92600 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT9Q92600 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.72■□□□□ 0.59
CNOT9Q92600 AC013268.1-206ENST00000638368 961 ntBASIC18.72■□□□□ 0.59
CNOT9Q92600 AC112229.1-201ENST00000639295 961 ntBASIC18.72■□□□□ 0.59
CNOT9Q92600 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CNOT9Q92600 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT9Q92600 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNOT9Q92600 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.72■□□□□ 0.59
CNOT9Q92600 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.72■□□□□ 0.59
CNOT9Q92600 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.72■□□□□ 0.59
CNOT9Q92600 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CNOT9Q92600 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNOT9Q92600 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms