Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTCD2Q8WV60 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 AC093787.1-201ENST00000450396 207 ntBASIC20.59■□□□□ 0.89
PTCD2Q8WV60 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 AL138781.1-201ENST00000566567 1274 ntBASIC20.59■□□□□ 0.89
PTCD2Q8WV60 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTCD2Q8WV60 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 CDV3P1-201ENST00000471403 739 ntBASIC20.58■□□□□ 0.89
PTCD2Q8WV60 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 AC105036.2-201ENST00000569468 176 ntBASIC20.58■□□□□ 0.89
PTCD2Q8WV60 AC016405.3-201ENST00000607710 860 ntBASIC20.58■□□□□ 0.89
PTCD2Q8WV60 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.58■□□□□ 0.89
PTCD2Q8WV60 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTCD2Q8WV60 AC092720.2-201ENST00000602388 1665 ntBASIC20.58■□□□□ 0.88
PTCD2Q8WV60 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTCD2Q8WV60 AL162377.1-201ENST00000618844 1793 ntBASIC20.57■□□□□ 0.88
PTCD2Q8WV60 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 AC098934.4-201ENST00000564127 592 ntBASIC20.56■□□□□ 0.88
PTCD2Q8WV60 AC133552.2-202ENST00000575694 574 ntBASIC20.56■□□□□ 0.88
PTCD2Q8WV60 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PTCD2Q8WV60 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTCD2Q8WV60 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms