Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGEF40Q8TER5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC30.58■■■□□ 2.49
ARHGEF40Q8TER5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGEF40Q8TER5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.57■■■□□ 2.49
ARHGEF40Q8TER5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
ARHGEF40Q8TER5 TPM4P1-201ENST00000436100 807 ntBASIC30.57■■■□□ 2.49
ARHGEF40Q8TER5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.57■■■□□ 2.49
ARHGEF40Q8TER5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 AC092053.2-201ENST00000640557 1818 ntBASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 DUSP5P1-201ENST00000441325 1139 ntBASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 AP002982.1-201ENST00000492365 877 ntBASIC30.57■■■□□ 2.48
ARHGEF40Q8TER5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF40Q8TER5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC30.56■■■□□ 2.48
ARHGEF40Q8TER5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF40Q8TER5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF40Q8TER5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF40Q8TER5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARHGEF40Q8TER5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
ARHGEF40Q8TER5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 AC010542.4-201ENST00000563151 1910 ntBASIC30.55■■■□□ 2.48
ARHGEF40Q8TER5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 KRT16P1-201ENST00000399124 1418 ntBASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 AC091076.1-201ENST00000610741 619 ntBASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARHGEF40Q8TER5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 F2R-202ENST00000505600 442 ntTSL 2 BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 AC093323.1-202ENST00000635031 2045 ntBASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.53■■■□□ 2.48
ARHGEF40Q8TER5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 AC027702.1-201ENST00000563810 1770 ntBASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 AC063952.2-201ENST00000498792 1227 ntBASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC30.52■■■□□ 2.48
ARHGEF40Q8TER5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
ARHGEF40Q8TER5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC30.51■■■□□ 2.48
ARHGEF40Q8TER5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
ARHGEF40Q8TER5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC30.51■■■□□ 2.47
ARHGEF40Q8TER5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.51■■■□□ 2.47
ARHGEF40Q8TER5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC30.51■■■□□ 2.47
ARHGEF40Q8TER5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.51■■■□□ 2.47
ARHGEF40Q8TER5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 KRT126P-201ENST00000549467 1181 ntBASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
ARHGEF40Q8TER5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.49■■■□□ 2.47
ARHGEF40Q8TER5 KRT18P56-201ENST00000507275 550 ntBASIC30.49■■■□□ 2.47
ARHGEF40Q8TER5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ARHGEF40Q8TER5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ARHGEF40Q8TER5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGEF40Q8TER5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC30.48■■■□□ 2.47
ARHGEF40Q8TER5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGEF40Q8TER5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGEF40Q8TER5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms