Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM11BQ8TCY0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 MIR4508-201ENST00000584178 70 ntBASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM11BQ8TCY0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 RARRES2P2-201ENST00000394842 485 ntBASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.21□□□□□ -0.29
SMIM11BQ8TCY0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 AC093503.3-201ENST00000624917 2352 ntBASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM11BQ8TCY0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 AC241377.3-202ENST00000626088 1088 ntBASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 AC241585.3-202ENST00000628937 1088 ntBASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 AC245100.8-202ENST00000629247 1058 ntBASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms