Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 RPS2P55-201ENST00000397318 883 ntBASIC17.69■□□□□ 0.42
LINC01560Q8TB33 KRASP1-201ENST00000407852 552 ntBASIC17.69■□□□□ 0.42
LINC01560Q8TB33 TSPY7P-201ENST00000431358 1114 ntBASIC17.69■□□□□ 0.42
LINC01560Q8TB33 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 AC107956.1-201ENST00000494359 873 ntBASIC17.69■□□□□ 0.42
LINC01560Q8TB33 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC01560Q8TB33 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 AC211429.1-201ENST00000415277 523 ntBASIC17.68■□□□□ 0.42
LINC01560Q8TB33 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC01560Q8TB33 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 AC133681.1-201ENST00000465482 601 ntBASIC17.67■□□□□ 0.42
LINC01560Q8TB33 AC233702.5-201ENST00000584107 538 ntBASIC17.67■□□□□ 0.42
LINC01560Q8TB33 AC110285.5-201ENST00000611501 352 ntBASIC17.67■□□□□ 0.42
LINC01560Q8TB33 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC01560Q8TB33 ECEL1P1-201ENST00000373592 1742 ntBASIC17.67■□□□□ 0.42
LINC01560Q8TB33 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 AC012618.2-201ENST00000428058 849 ntBASIC17.66■□□□□ 0.42
LINC01560Q8TB33 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC01560Q8TB33 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
LINC01560Q8TB33 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms