Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 AC245052.3-201ENST00000450182 901 ntBASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 AL354811.1-201ENST00000610286 706 ntBASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS1Q8NFJ9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 MIR2861-201ENST00000636310 90 ntBASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.28■□□□□ 0.52
BBS1Q8NFJ9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 AC138907.5-202ENST00000569484 235 ntBASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS1Q8NFJ9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BBS1Q8NFJ9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.27■□□□□ 0.51
BBS1Q8NFJ9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BBS1Q8NFJ9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 AL158211.5-201ENST00000623583 2518 ntBASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 KRT16P2-201ENST00000414673 1423 ntBASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 AC116562.4-201ENST00000641316 2276 ntBASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS1Q8NFJ9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BBS1Q8NFJ9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms