Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 KRT18P5-201ENST00000436075 1291 ntBASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 FP700111.2-201ENST00000619190 1892 ntBASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF439Q8NDP4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF439Q8NDP4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 HCG11-201ENST00000411553 5696 ntBASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 AC092667.1-201ENST00000434301 2586 ntBASIC16.81■□□□□ 0.28
ZNF439Q8NDP4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF439Q8NDP4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF439Q8NDP4 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms