Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 AL512408.1-201ENST00000569378 2000 ntBASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 TERF1P5-201ENST00000477545 1207 ntBASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 AC010536.3-201ENST00000620306 533 ntBASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSMEM1Q8N8F7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 FAM21FP-204ENST00000608637 956 ntBASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.62■□□□□ 0.57
LSMEM1Q8N8F7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 KRT8P36-201ENST00000489121 1440 ntBASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 AL162412.1-201ENST00000567129 965 ntBASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSMEM1Q8N8F7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AC026271.2-201ENST00000428091 497 ntBASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 KRT18P5-201ENST00000436075 1291 ntBASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AC007322.4-201ENST00000509611 723 ntBASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.6■□□□□ 0.57
LSMEM1Q8N8F7 AL591742.1-201ENST00000604433 565 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms