Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF7Q8N684 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF7Q8N684 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF7Q8N684 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF7Q8N684 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CPSF7Q8N684 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.87■□□□□ 0.77
CPSF7Q8N684 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF7Q8N684 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.86■□□□□ 0.77
CPSF7Q8N684 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPSF7Q8N684 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.86■□□□□ 0.77
CPSF7Q8N684 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.86■□□□□ 0.77
CPSF7Q8N684 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF7Q8N684 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF7Q8N684 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CPSF7Q8N684 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF7Q8N684 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF7Q8N684 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPSF7Q8N684 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF7Q8N684 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 AC092720.2-201ENST00000602388 1665 ntBASIC19.85■□□□□ 0.77
CPSF7Q8N684 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF7Q8N684 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF7Q8N684 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 AC004911.1-201ENST00000416316 871 ntBASIC19.85■□□□□ 0.77
CPSF7Q8N684 RARRES2P11-201ENST00000635158 484 ntBASIC19.85■□□□□ 0.77
CPSF7Q8N684 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF7Q8N684 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
CPSF7Q8N684 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF7Q8N684 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPSF7Q8N684 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF7Q8N684 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF7Q8N684 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF7Q8N684 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF7Q8N684 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF7Q8N684 AC090192.1-201ENST00000517740 490 ntBASIC19.84■□□□□ 0.77
CPSF7Q8N684 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 BX323043.1-201ENST00000641006 1765 ntBASIC19.84■□□□□ 0.77
CPSF7Q8N684 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF7Q8N684 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CPSF7Q8N684 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CPSF7Q8N684 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CPSF7Q8N684 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.83■□□□□ 0.77
CPSF7Q8N684 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CPSF7Q8N684 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.83■□□□□ 0.77
CPSF7Q8N684 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF7Q8N684 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF7Q8N684 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.83■□□□□ 0.76
CPSF7Q8N684 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF7Q8N684 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF7Q8N684 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CPSF7Q8N684 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF7Q8N684 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF7Q8N684 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.82■□□□□ 0.76
CPSF7Q8N684 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms