Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
C11orf42Q8N5U0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 NCF1B-203ENST00000435988 1254 ntBASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 OR10C1-204ENST00000622521 1039 ntBASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
C11orf42Q8N5U0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
C11orf42Q8N5U0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
C11orf42Q8N5U0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 AL512625.2-201ENST00000417533 625 ntBASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
C11orf42Q8N5U0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 AC006970.2-201ENST00000450065 779 ntBASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 AC083906.2-201ENST00000511578 360 ntBASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.88■□□□□ 0.29
C11orf42Q8N5U0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 AC093787.1-201ENST00000450396 207 ntBASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 AC069236.1-201ENST00000604339 616 ntBASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C11orf42Q8N5U0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms