Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.9■□□□□ 0.94
SIX5Q8N196 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.9■□□□□ 0.94
SIX5Q8N196 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.9■□□□□ 0.94
SIX5Q8N196 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.9■□□□□ 0.94
SIX5Q8N196 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.9■□□□□ 0.94
SIX5Q8N196 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.9■□□□□ 0.94
SIX5Q8N196 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 AC005363.2-201ENST00000618631 242 ntBASIC20.9■□□□□ 0.94
SIX5Q8N196 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.9■□□□□ 0.94
SIX5Q8N196 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIX5Q8N196 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.89■□□□□ 0.94
SIX5Q8N196 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIX5Q8N196 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SIX5Q8N196 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIX5Q8N196 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIX5Q8N196 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.89■□□□□ 0.93
SIX5Q8N196 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIX5Q8N196 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIX5Q8N196 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.89■□□□□ 0.93
SIX5Q8N196 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.89■□□□□ 0.93
SIX5Q8N196 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.89■□□□□ 0.93
SIX5Q8N196 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.89■□□□□ 0.93
SIX5Q8N196 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.89■□□□□ 0.93
SIX5Q8N196 AF186192.3-201ENST00000583427 947 ntBASIC20.89■□□□□ 0.93
SIX5Q8N196 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.89■□□□□ 0.93
SIX5Q8N196 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SIX5Q8N196 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIX5Q8N196 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIX5Q8N196 AL024507.2-201ENST00000606070 2574 ntBASIC20.89■□□□□ 0.93
SIX5Q8N196 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SIX5Q8N196 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SIX5Q8N196 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.88■□□□□ 0.93
SIX5Q8N196 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
SIX5Q8N196 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIX5Q8N196 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SIX5Q8N196 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SIX5Q8N196 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.87■□□□□ 0.93
SIX5Q8N196 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.87■□□□□ 0.93
SIX5Q8N196 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.87■□□□□ 0.93
SIX5Q8N196 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.87■□□□□ 0.93
SIX5Q8N196 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.87■□□□□ 0.93
SIX5Q8N196 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SIX5Q8N196 AC145285.6-201ENST00000604632 637 ntBASIC20.87■□□□□ 0.93
SIX5Q8N196 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.87■□□□□ 0.93
SIX5Q8N196 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
SIX5Q8N196 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIX5Q8N196 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.86■□□□□ 0.93
SIX5Q8N196 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 HTR7P1-201ENST00000538670 1336 ntBASIC20.86■□□□□ 0.93
SIX5Q8N196 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.86■□□□□ 0.93
SIX5Q8N196 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.86■□□□□ 0.93
SIX5Q8N196 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.86■□□□□ 0.93
SIX5Q8N196 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SIX5Q8N196 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.86■□□□□ 0.93
SIX5Q8N196 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.86■□□□□ 0.93
SIX5Q8N196 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.86■□□□□ 0.93
SIX5Q8N196 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIX5Q8N196 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms