Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.83■□□□□ 0.6
C9orf40Q8IXQ3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
C9orf40Q8IXQ3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf40Q8IXQ3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.83■□□□□ 0.6
C9orf40Q8IXQ3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 C2orf69P4-201ENST00000565394 541 ntBASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf40Q8IXQ3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf40Q8IXQ3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 KRT18P6-201ENST00000555540 1265 ntBASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
C9orf40Q8IXQ3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
C9orf40Q8IXQ3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.78■□□□□ 0.6
C9orf40Q8IXQ3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms