Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 AC125437.2-201ENST00000625180 2167 ntBASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 RARRES2P2-201ENST00000394842 485 ntBASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CROCCP3Q8IVE0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 AC068587.7-201ENST00000641602 218 ntBASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CROCCP3Q8IVE0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 AL034346.1-201ENST00000568244 1277 ntBASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 PVT1_1.1-201ENST00000615125 194 ntBASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CROCCP3Q8IVE0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CROCCP3Q8IVE0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CROCCP3Q8IVE0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
CROCCP3Q8IVE0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CROCCP3Q8IVE0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CROCCP3Q8IVE0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CROCCP3Q8IVE0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms