Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 AL596275.1-201ENST00000423464 877 ntBASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
DCLRE1AQ6PJP8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 MIR2861-201ENST00000636310 90 ntBASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DCLRE1AQ6PJP8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.8■■□□□ 1.08
DCLRE1AQ6PJP8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 POM121L13P-201ENST00000422362 380 ntBASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 AC005829.2-201ENST00000571422 1056 ntBASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 RN7SL471P-201ENST00000580476 299 ntBASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 KRT8P36-201ENST00000489121 1440 ntBASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
DCLRE1AQ6PJP8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 FEM1AP4-201ENST00000443167 1987 ntBASIC21.78■■□□□ 1.08
DCLRE1AQ6PJP8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.77■■□□□ 1.08
DCLRE1AQ6PJP8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms