Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PRAMEF20Q5VT98 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF20Q5VT98 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF20Q5VT98 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEF20Q5VT98 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEF20Q5VT98 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEF20Q5VT98 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRAMEF20Q5VT98 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRAMEF20Q5VT98 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
PRAMEF20Q5VT98 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 ABHD17AP1-201ENST00000358206 933 ntBASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRAMEF20Q5VT98 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 MIR2861-201ENST00000636310 90 ntBASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRAMEF20Q5VT98 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRAMEF20Q5VT98 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms