Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00242Q5T6M2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 UNC93B3-201ENST00000308076 687 ntBASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00242Q5T6M2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
LINC00242Q5T6M2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00242Q5T6M2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 MIR2861-201ENST00000636310 90 ntBASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 TSPY26P-201ENST00000476365 1326 ntBASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00242Q5T6M2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 POU5F1P4-201ENST00000413175 1085 ntBASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 AC024257.2-201ENST00000549699 147 ntBASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 AC008175.2-201ENST00000612840 297 ntBASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 AC098818.2-201ENST00000564925 2320 ntBASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00242Q5T6M2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00242Q5T6M2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms