Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 AC011767.1-201ENST00000617410 1153 ntBASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
ATP13A4Q4VNC1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 MFSD11-216ENST00000590393 1141 ntBASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATP13A4Q4VNC1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 AL162430.1-201ENST00000480705 870 ntBASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 AC016405.3-201ENST00000607710 860 ntBASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP13A4Q4VNC1 KRT8P36-201ENST00000489121 1440 ntBASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 CDV3P1-201ENST00000471403 739 ntBASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.21■□□□□ 0.99
ATP13A4Q4VNC1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ATP13A4Q4VNC1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 AL591742.1-201ENST00000604433 565 ntBASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATP13A4Q4VNC1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP13A4Q4VNC1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms