Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM60Q495X7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM60Q495X7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 AP000525.1-201ENST00000608286 694 ntBASIC22.5■■□□□ 1.19
TRIM60Q495X7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM60Q495X7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM60Q495X7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM60Q495X7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM60Q495X7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM60Q495X7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TRIM60Q495X7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM60Q495X7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
TRIM60Q495X7 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM60Q495X7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM60Q495X7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM60Q495X7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM60Q495X7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRIM60Q495X7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM60Q495X7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM60Q495X7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 AC113347.1-201ENST00000413321 391 ntBASIC22.48■■□□□ 1.19
TRIM60Q495X7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 AL121829.2-201ENST00000620908 328 ntBASIC22.48■■□□□ 1.19
TRIM60Q495X7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM60Q495X7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM60Q495X7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM60Q495X7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM60Q495X7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM60Q495X7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
TRIM60Q495X7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 AC073195.1-201ENST00000607241 877 ntBASIC22.47■■□□□ 1.19
TRIM60Q495X7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM60Q495X7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 NBPF21P-201ENST00000425093 1451 ntBASIC22.47■■□□□ 1.19
TRIM60Q495X7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM60Q495X7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 MIR1238-201ENST00000408483 83 ntBASIC22.46■■□□□ 1.19
TRIM60Q495X7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM60Q495X7 REXO1L10P-201ENST00000615707 1290 ntBASIC22.46■■□□□ 1.19
TRIM60Q495X7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 LINC01568-207ENST00000641790 1380 ntBASIC22.46■■□□□ 1.19
TRIM60Q495X7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM60Q495X7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM60Q495X7 UNC93B2-201ENST00000285383 730 ntBASIC22.45■■□□□ 1.18
TRIM60Q495X7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM60Q495X7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM60Q495X7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 NUDT16P1-203ENST00000513809 620 ntBASIC22.45■■□□□ 1.18
TRIM60Q495X7 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM60Q495X7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.45■■□□□ 1.18
TRIM60Q495X7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms