Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM12Q3MHD2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 AL158211.5-201ENST00000623583 2518 ntBASIC19.78■□□□□ 0.76
LSM12Q3MHD2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 AC142381.2-201ENST00000566120 298 ntBASIC19.78■□□□□ 0.76
LSM12Q3MHD2 RARRES2P11-201ENST00000635158 484 ntBASIC19.78■□□□□ 0.76
LSM12Q3MHD2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.78■□□□□ 0.76
LSM12Q3MHD2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.77■□□□□ 0.76
LSM12Q3MHD2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 AL358852.1-201ENST00000623174 1268 ntBASIC19.77■□□□□ 0.76
LSM12Q3MHD2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LSM12Q3MHD2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LSM12Q3MHD2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LSM12Q3MHD2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 AL020996.1-203ENST00000536896 2307 ntBASIC19.76■□□□□ 0.75
LSM12Q3MHD2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM12Q3MHD2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM12Q3MHD2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.74■□□□□ 0.75
LSM12Q3MHD2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LSM12Q3MHD2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms