Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 VMR1YHL035C 4779 nt2.06□□□□□ -2.08
RUP1Q12242 SMB1YER029C 591 nt2.06□□□□□ -2.08
RUP1Q12242 YGR045CYGR045C 363 nt2.06□□□□□ -2.08
RUP1Q12242 ATP7YKL016C 525 nt2.06□□□□□ -2.08
RUP1Q12242 UTP30YKR060W 825 nt2.06□□□□□ -2.08
RUP1Q12242 IRC19YLL033W 693 nt2.06□□□□□ -2.08
RUP1Q12242 GRX8YLR364W 330 nt2.06□□□□□ -2.08
RUP1Q12242 YBL012CYBL012C 402 nt2.06□□□□□ -2.08
RUP1Q12242 YMR052C-AYMR052C-A 366 nt2.06□□□□□ -2.08
RUP1Q12242 YNL122CYNL122C 348 nt2.06□□□□□ -2.08
RUP1Q12242 HSL1YKL101W 4557 nt2.05□□□□□ -2.08
RUP1Q12242 YFR016CYFR016C 3702 nt2.05□□□□□ -2.08
RUP1Q12242 YDL068WYDL068W 330 nt2.05□□□□□ -2.08
RUP1Q12242 SMD1YGR074W 441 nt2.05□□□□□ -2.08
RUP1Q12242 RPF1YHR088W 888 nt2.05□□□□□ -2.08
RUP1Q12242 YKL111CYKL111C 336 nt2.05□□□□□ -2.08
RUP1Q12242 YOL013W-BYOL013W-B 291 nt2.05□□□□□ -2.08
RUP1Q12242 GAL7YBR018C 1101 nt2.05□□□□□ -2.08
RUP1Q12242 AFI1YOR129C 2682 nt2.05□□□□□ -2.08
RUP1Q12242 SPE1YKL184W 1401 nt2.05□□□□□ -2.08
RUP1Q12242 ALK2YBL009W 2031 nt2.05□□□□□ -2.08
RUP1Q12242 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
RUP1Q12242 KAP123YER110C 3342 nt2.04□□□□□ -2.08
RUP1Q12242 CDC50YCR094W 1176 nt2.04□□□□□ -2.08
RUP1Q12242 MZM1YDR493W 372 nt2.04□□□□□ -2.08
RUP1Q12242 MTC7YEL033W 420 nt2.04□□□□□ -2.08
RUP1Q12242 YLR202CYLR202C 327 nt2.04□□□□□ -2.08
RUP1Q12242 COX7YMR256C 183 nt2.04□□□□□ -2.08
RUP1Q12242 ROX1YPR065W 1107 nt2.04□□□□□ -2.08
RUP1Q12242 RPB5YBR154C 648 nt2.04□□□□□ -2.08
RUP1Q12242 SPO22YIL073C 2928 nt2.03□□□□□ -2.08
RUP1Q12242 YER084W-AYER084W-A 513 nt2.03□□□□□ -2.08
RUP1Q12242 PBI2YNL015W 228 nt2.03□□□□□ -2.08
RUP1Q12242 NOP15YNL110C 663 nt2.03□□□□□ -2.08
RUP1Q12242 ATP19YOL077W-A 207 nt2.03□□□□□ -2.08
RUP1Q12242 RTC6YPL183W-A 282 nt2.03□□□□□ -2.08
RUP1Q12242 HOP2YGL033W 657 nt2.02□□□□□ -2.09
RUP1Q12242 VOA1YGR106C 798 nt2.02□□□□□ -2.09
RUP1Q12242 tT(UGU)Q1tT(UGU)Q1 76 nt2.02□□□□□ -2.09
RUP1Q12242 YLR456WYLR456W 615 nt2.02□□□□□ -2.09
RUP1Q12242 SEN15YMR059W 387 nt2.02□□□□□ -2.09
RUP1Q12242 SPC29YPL124W 762 nt2.02□□□□□ -2.09
RUP1Q12242 YJL016WYJL016W 1686 nt2.02□□□□□ -2.09
RUP1Q12242 VPS52YDR484W 1926 nt2.01□□□□□ -2.09
RUP1Q12242 LSO2YGR169C-A 279 nt2.01□□□□□ -2.09
RUP1Q12242 RPL16AYIL133C 600 nt2.01□□□□□ -2.09
RUP1Q12242 YOR333CYOR333C 417 nt2.01□□□□□ -2.09
RUP1Q12242 YPL068CYPL068C 882 nt2.01□□□□□ -2.09
RUP1Q12242 MF(ALPHA)1YPL187W 498 nt2.01□□□□□ -2.09
RUP1Q12242 IRC10YOL015W 1761 nt2□□□□□ -2.09
RUP1Q12242 ELG1YOR144C 2376 nt2□□□□□ -2.09
RUP1Q12242 COX13YGL191W 390 nt2□□□□□ -2.09
RUP1Q12242 RPS22BYLR367W 393 nt2□□□□□ -2.09
RUP1Q12242 YNL010WYNL010W 726 nt2□□□□□ -2.09
RUP1Q12242 PET123YOR158W 957 nt2□□□□□ -2.09
RUP1Q12242 YOR394C-AYOR394C-A 168 nt2□□□□□ -2.09
RUP1Q12242 REV3YPL167C 4515 nt2□□□□□ -2.09
RUP1Q12242 SWT1YOR166C 1377 nt1.99□□□□□ -2.09
RUP1Q12242 YDL041WYDL041W 354 nt1.99□□□□□ -2.09
RUP1Q12242 YER188C-AYER188C-A 300 nt1.99□□□□□ -2.09
RUP1Q12242 BRP1YGL007W 378 nt1.99□□□□□ -2.09
RUP1Q12242 MSS18YPR134W 807 nt1.99□□□□□ -2.09
RUP1Q12242 NIC96YFR002W 2520 nt1.99□□□□□ -2.09
RUP1Q12242 SET2YJL168C 2202 nt1.99□□□□□ -2.09
RUP1Q12242 RUD3YOR216C 1455 nt1.99□□□□□ -2.09
RUP1Q12242 RNH70YGR276C 1662 nt1.99□□□□□ -2.09
RUP1Q12242 YPR097WYPR097W 3222 nt1.98□□□□□ -2.09
RUP1Q12242 CDC53YDL132W 2448 nt1.98□□□□□ -2.09
RUP1Q12242 CAJ1YER048C 1176 nt1.98□□□□□ -2.09
RUP1Q12242 RRF1YHR038W 693 nt1.98□□□□□ -2.09
RUP1Q12242 YHR139C-AYHR139C-A 312 nt1.98□□□□□ -2.09
RUP1Q12242 RPI1YIL119C 1224 nt1.98□□□□□ -2.09
RUP1Q12242 SEC22YLR268W 645 nt1.98□□□□□ -2.09
RUP1Q12242 VPH1YOR270C 2523 nt1.98□□□□□ -2.09
RUP1Q12242 VPS35YJL154C 2835 nt1.98□□□□□ -2.09
RUP1Q12242 RGA1YOR127W 3024 nt1.98□□□□□ -2.09
RUP1Q12242 SHE9YDR393W 1371 nt1.98□□□□□ -2.09
RUP1Q12242 IRC20YLR247C 4671 nt1.97□□□□□ -2.09
RUP1Q12242 YEL057CYEL057C 702 nt1.97□□□□□ -2.09
RUP1Q12242 MSL1YIR009W 336 nt1.97□□□□□ -2.09
RUP1Q12242 SIP18YMR175W 240 nt1.97□□□□□ -2.09
RUP1Q12242 MET18YIL128W 3099 nt1.97□□□□□ -2.09
RUP1Q12242 STB4YMR019W 2850 nt1.96□□□□□ -2.09
RUP1Q12242 TRL1YJL087C 2484 nt1.96□□□□□ -2.1
RUP1Q12242 COS111YBR203W 2775 nt1.96□□□□□ -2.1
RUP1Q12242 snR79snR79 84 nt1.96□□□□□ -2.1
RUP1Q12242 YHR071C-AYHR071C-A 321 nt1.96□□□□□ -2.1
RUP1Q12242 VPS8YAL002W 3825 nt1.96□□□□□ -2.1
RUP1Q12242 AIM29YKR074W 468 nt1.96□□□□□ -2.1
RUP1Q12242 YKR075W-AYKR075W-A 270 nt1.96□□□□□ -2.1
RUP1Q12242 LCL2YLR104W 396 nt1.96□□□□□ -2.1
RUP1Q12242 YLR269CYLR269C 351 nt1.96□□□□□ -2.1
RUP1Q12242 VPS20YMR077C 666 nt1.96□□□□□ -2.1
RUP1Q12242 TOM22YNL131W 459 nt1.96□□□□□ -2.1
RUP1Q12242 YOR248WYOR248W 303 nt1.96□□□□□ -2.1
RUP1Q12242 EGD1YPL037C 474 nt1.96□□□□□ -2.1
RUP1Q12242 SLM6YBR266C 453 nt1.96□□□□□ -2.1
RUP1Q12242 MUD2YKL074C 1584 nt1.96□□□□□ -2.1
RUP1Q12242 PPN1YDR452W 2025 nt1.96□□□□□ -2.1
RUP1Q12242 MNE1YOR350C 1992 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms