Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 LEU3YLR451W 2661 nt3.44□□□□□ -1.86
UBP3Q01477 YOR008C-AYOR008C-A 225 nt3.43□□□□□ -1.86
UBP3Q01477 CIN8YEL061C 3003 nt3.43□□□□□ -1.86
UBP3Q01477 ECM5YMR176W 4236 nt3.43□□□□□ -1.86 RIP-Chip
UBP3Q01477 ECM25YJL201W 1800 nt3.42□□□□□ -1.86
UBP3Q01477 PUF4YGL014W 2667 nt3.42□□□□□ -1.86
UBP3Q01477 PUF6YDR496C 1971 nt3.42□□□□□ -1.86
UBP3Q01477 YNL170WYNL170W 396 nt3.42□□□□□ -1.86
UBP3Q01477 RPL36BYPL249C-A 303 nt3.42□□□□□ -1.86 RIP-Chip
UBP3Q01477 RAD61YDR014W 1944 nt3.42□□□□□ -1.86
UBP3Q01477 FLO5YHR211W 3228 nt3.42□□□□□ -1.86
UBP3Q01477 NET1YJL076W 3570 nt3.41□□□□□ -1.86
UBP3Q01477 NAN1YPL126W 2691 nt3.41□□□□□ -1.86
UBP3Q01477 YIL058WYIL058W 285 nt3.41□□□□□ -1.86
UBP3Q01477 YBR064WYBR064W 429 nt3.41□□□□□ -1.86
UBP3Q01477 MGR1YCL044C 1254 nt3.41□□□□□ -1.86
UBP3Q01477 YMR317WYMR317W 3423 nt3.41□□□□□ -1.86
UBP3Q01477 CDC24YAL041W 2565 nt3.4□□□□□ -1.86
UBP3Q01477 RPS24AYER074W 408 nt3.4□□□□□ -1.87
UBP3Q01477 YOR073W-AYOR073W-A 234 nt3.4□□□□□ -1.87
UBP3Q01477 MF(ALPHA)1YPL187W 498 nt3.4□□□□□ -1.87
UBP3Q01477 SPO71YDR104C 3738 nt3.4□□□□□ -1.87
UBP3Q01477 NUP120YKL057C 3114 nt3.4□□□□□ -1.87
UBP3Q01477 VPS52YDR484W 1926 nt3.4□□□□□ -1.87
UBP3Q01477 ITC1YGL133W 3795 nt3.4□□□□□ -1.87 RIP-Chip
UBP3Q01477 YJL016WYJL016W 1686 nt3.39□□□□□ -1.87
UBP3Q01477 BAS1YKR099W 2436 nt3.39□□□□□ -1.87
UBP3Q01477 CHO2YGR157W 2610 nt3.39□□□□□ -1.87
UBP3Q01477 YDL041WYDL041W 354 nt3.39□□□□□ -1.87
UBP3Q01477 snR76snR76 109 nt3.39□□□□□ -1.87
UBP3Q01477 YIL102CYIL102C 306 nt3.39□□□□□ -1.87
UBP3Q01477 YNL338WYNL338W 159 nt3.39□□□□□ -1.87
UBP3Q01477 YPL182CYPL182C 384 nt3.39□□□□□ -1.87
UBP3Q01477 NPR2YEL062W 1848 nt3.39□□□□□ -1.87
UBP3Q01477 CSR2YPR030W 3366 nt3.38□□□□□ -1.87 RIP-Chip
UBP3Q01477 YDR193WYDR193W 399 nt3.38□□□□□ -1.87
UBP3Q01477 YGR174W-AYGR174W-A 87 nt3.38□□□□□ -1.87
UBP3Q01477 HTB2YBL002W 396 nt3.38□□□□□ -1.87
UBP3Q01477 YMR230W-AYMR230W-A 189 nt3.38□□□□□ -1.87
UBP3Q01477 TRS65YGR166W 1683 nt3.38□□□□□ -1.87
UBP3Q01477 GYP7YDL234C 2241 nt3.38□□□□□ -1.87
UBP3Q01477 NUP82YJL061W 2142 nt3.37□□□□□ -1.87
UBP3Q01477 SSY1YDR160W 2559 nt3.37□□□□□ -1.87
UBP3Q01477 YJL020W-AYJL020W-A 258 nt3.37□□□□□ -1.87
UBP3Q01477 RPS18BYML026C 441 nt3.37□□□□□ -1.87
UBP3Q01477 ATP15YPL271W 189 nt3.37□□□□□ -1.87
UBP3Q01477 COG8YML071C 1824 nt3.37□□□□□ -1.87
UBP3Q01477 AIM9YER080W 1884 nt3.37□□□□□ -1.87 RIP-Chip
UBP3Q01477 PSK2YOL045W 3306 nt3.36□□□□□ -1.87
UBP3Q01477 SSN2YDR443C 4263 nt3.36□□□□□ -1.87
UBP3Q01477 YDR048CYDR048C 315 nt3.36□□□□□ -1.87
UBP3Q01477 tQ(UUG)BtQ(UUG)B 72 nt3.36□□□□□ -1.87
UBP3Q01477 HSK3YKL138C-A 210 nt3.36□□□□□ -1.87
UBP3Q01477 LCL2YLR104W 396 nt3.36□□□□□ -1.87
UBP3Q01477 DBP6YNR038W 1890 nt3.36□□□□□ -1.87
UBP3Q01477 PSO2YMR137C 1986 nt3.36□□□□□ -1.87
UBP3Q01477 KEL2YGR238C 2649 nt3.35□□□□□ -1.87
UBP3Q01477 YDL185C-AYDL185C-A 228 nt3.35□□□□□ -1.87
UBP3Q01477 RGM1YMR182C 636 nt3.35□□□□□ -1.87
UBP3Q01477 DNL4YOR005C 2835 nt3.35□□□□□ -1.87
UBP3Q01477 SSE1YPL106C 2082 nt3.35□□□□□ -1.87 RIP-Chip
UBP3Q01477 RRM3YHR031C 2172 nt3.35□□□□□ -1.87 RIP-Chip
UBP3Q01477 VPS41YDR080W 2979 nt3.35□□□□□ -1.87
UBP3Q01477 DUG2YBR281C 2637 nt3.35□□□□□ -1.87
UBP3Q01477 YHR080CYHR080C 4038 nt3.35□□□□□ -1.87
UBP3Q01477 KAP104YBR017C 2757 nt3.34□□□□□ -1.87
UBP3Q01477 RPL40AYIL148W 387 nt3.34□□□□□ -1.87
UBP3Q01477 YMR172C-AYMR172C-A 384 nt3.34□□□□□ -1.87
UBP3Q01477 RPL32YBL092W 393 nt3.34□□□□□ -1.87 RIP-Chip
UBP3Q01477 MET6YER091C 2304 nt3.34□□□□□ -1.87
UBP3Q01477 YPK1YKL126W 2043 nt3.34□□□□□ -1.88
UBP3Q01477 YJL181WYJL181W 1836 nt3.33□□□□□ -1.88 RIP-Chip
UBP3Q01477 RPA190YOR341W 4995 nt3.33□□□□□ -1.88
UBP3Q01477 YKR033CYKR033C 426 nt3.33□□□□□ -1.88
UBP3Q01477 CCW14YLR390W-A 717 nt3.33□□□□□ -1.88
UBP3Q01477 YOR302WYOR302W 78 nt3.33□□□□□ -1.88
UBP3Q01477 POL2YNL262W 6669 nt3.33□□□□□ -1.88
UBP3Q01477 GIS4YML006C 2325 nt3.33□□□□□ -1.88
UBP3Q01477 STE6YKL209C 3873 nt3.32□□□□□ -1.88
UBP3Q01477 FIR1YER032W 2631 nt3.32□□□□□ -1.88
UBP3Q01477 GCV2YMR189W 3105 nt3.32□□□□□ -1.88
UBP3Q01477 YIL032CYIL032C 357 nt3.32□□□□□ -1.88
UBP3Q01477 YNL205CYNL205C 423 nt3.32□□□□□ -1.88
UBP3Q01477 GCN1YGL195W 8019 nt3.32□□□□□ -1.88
UBP3Q01477 BRO1YPL084W 2535 nt3.32□□□□□ -1.88
UBP3Q01477 REV1YOR346W 2958 nt3.31□□□□□ -1.88 RIP-Chip
UBP3Q01477 SIN3YOL004W 4611 nt3.31□□□□□ -1.88
UBP3Q01477 MVP1YMR004W 1536 nt3.31□□□□□ -1.88 RIP-Chip
UBP3Q01477 SDH6YDR379C-A 240 nt3.31□□□□□ -1.88 RIP-Chip
UBP3Q01477 YHL042WYHL042W 453 nt3.31□□□□□ -1.88
UBP3Q01477 YLR342W-AYLR342W-A 174 nt3.31□□□□□ -1.88
UBP3Q01477 TRM7YBR061C 933 nt3.31□□□□□ -1.88
UBP3Q01477 YBR197CYBR197C 654 nt3.31□□□□□ -1.88
UBP3Q01477 ECM21YBL101C 3354 nt3.31□□□□□ -1.88
UBP3Q01477 VPS64YDR200C 1815 nt3.3□□□□□ -1.88
UBP3Q01477 DBP7YKR024C 2229 nt3.3□□□□□ -1.88 RIP-Chip
UBP3Q01477 snR55snR55 98 nt3.3□□□□□ -1.88
UBP3Q01477 YER121WYER121W 345 nt3.3□□□□□ -1.88 RIP-Chip
UBP3Q01477 PHD1YKL043W 1101 nt3.3□□□□□ -1.88 RIP-Chip
UBP3Q01477 FPR1YNL135C 345 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 78.9 ms