Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.07■□□□□ 0.96
IRX4P78413 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.07■□□□□ 0.96
IRX4P78413 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.07■□□□□ 0.96
IRX4P78413 AC083880.1-201ENST00000608266 535 ntBASIC21.07■□□□□ 0.96
IRX4P78413 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 AP004607.7-201ENST00000527152 1677 ntBASIC21.07■□□□□ 0.96
IRX4P78413 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
IRX4P78413 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
IRX4P78413 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
IRX4P78413 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.06■□□□□ 0.96
IRX4P78413 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
IRX4P78413 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.06■□□□□ 0.96
IRX4P78413 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
IRX4P78413 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
IRX4P78413 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
IRX4P78413 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.06■□□□□ 0.96
IRX4P78413 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.06■□□□□ 0.96
IRX4P78413 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.06■□□□□ 0.96
IRX4P78413 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.06■□□□□ 0.96
IRX4P78413 AC069236.1-201ENST00000604339 616 ntBASIC21.06■□□□□ 0.96
IRX4P78413 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
IRX4P78413 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX4P78413 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX4P78413 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IRX4P78413 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX4P78413 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.05■□□□□ 0.96
IRX4P78413 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX4P78413 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX4P78413 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
IRX4P78413 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
IRX4P78413 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX4P78413 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX4P78413 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.05■□□□□ 0.96
IRX4P78413 AL158047.1-201ENST00000445918 881 ntBASIC21.05■□□□□ 0.96
IRX4P78413 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.05■□□□□ 0.96
IRX4P78413 AC097658.1-201ENST00000475555 843 ntBASIC21.05■□□□□ 0.96
IRX4P78413 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX4P78413 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX4P78413 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX4P78413 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.05■□□□□ 0.96
IRX4P78413 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.05■□□□□ 0.96
IRX4P78413 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX4P78413 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IRX4P78413 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.05■□□□□ 0.96
IRX4P78413 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
IRX4P78413 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 LINC01006-201ENST00000333319 2292 ntBASIC21.04■□□□□ 0.96
IRX4P78413 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.04■□□□□ 0.96
IRX4P78413 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX4P78413 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.04■□□□□ 0.96
IRX4P78413 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.04■□□□□ 0.96
IRX4P78413 AL596275.1-201ENST00000423464 877 ntBASIC21.04■□□□□ 0.96
IRX4P78413 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
IRX4P78413 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
IRX4P78413 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX4P78413 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX4P78413 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX4P78413 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
IRX4P78413 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 AC003102.1-202ENST00000563394 1796 ntBASIC21.03■□□□□ 0.96
IRX4P78413 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.03■□□□□ 0.96
IRX4P78413 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.03■□□□□ 0.96
IRX4P78413 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX4P78413 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.03■□□□□ 0.96
IRX4P78413 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX4P78413 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
IRX4P78413 AC142381.4-202ENST00000563973 229 ntBASIC21.03■□□□□ 0.96
IRX4P78413 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms