Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.89■□□□□ 0.45
LSM6P62312 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM6P62312 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM6P62312 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 AC011767.1-201ENST00000617410 1153 ntBASIC17.89■□□□□ 0.45
LSM6P62312 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 AC073130.3-201ENST00000624389 2278 ntBASIC17.89■□□□□ 0.45
LSM6P62312 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LSM6P62312 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM6P62312 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM6P62312 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
LSM6P62312 AC087633.2-202ENST00000565166 1439 ntBASIC17.89■□□□□ 0.45
LSM6P62312 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM6P62312 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LSM6P62312 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LSM6P62312 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LSM6P62312 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LSM6P62312 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM6P62312 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LSM6P62312 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.88■□□□□ 0.45
LSM6P62312 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 BID-214ENST00000617586 542 ntTSL 5 BASIC17.88■□□□□ 0.45
LSM6P62312 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.88■□□□□ 0.45
LSM6P62312 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.88■□□□□ 0.45
LSM6P62312 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LSM6P62312 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
LSM6P62312 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LSM6P62312 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM6P62312 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.87■□□□□ 0.45
LSM6P62312 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 CNN2P6-201ENST00000439038 900 ntBASIC17.87■□□□□ 0.45
LSM6P62312 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.87■□□□□ 0.45
LSM6P62312 AC100791.3-201ENST00000617619 330 ntBASIC17.87■□□□□ 0.45
LSM6P62312 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LSM6P62312 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
LSM6P62312 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 AL512408.1-201ENST00000569378 2000 ntBASIC17.87■□□□□ 0.45
LSM6P62312 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSM6P62312 CYP21A1P-202ENST00000354927 1481 ntBASIC17.87■□□□□ 0.45
LSM6P62312 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LSM6P62312 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.87■□□□□ 0.45
LSM6P62312 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM6P62312 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LSM6P62312 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.86■□□□□ 0.45
LSM6P62312 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.86■□□□□ 0.45
LSM6P62312 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM6P62312 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSM6P62312 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM6P62312 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM6P62312 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSM6P62312 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LSM6P62312 RARRES2P4-201ENST00000514074 484 ntBASIC17.86■□□□□ 0.45
LSM6P62312 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.86■□□□□ 0.45
LSM6P62312 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.86■□□□□ 0.45
LSM6P62312 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LSM6P62312 AC016405.3-201ENST00000607710 860 ntBASIC17.86■□□□□ 0.45
LSM6P62312 AL356652.1-201ENST00000615962 565 ntBASIC17.86■□□□□ 0.45
LSM6P62312 AC231657.2-201ENST00000624556 255 ntBASIC17.86■□□□□ 0.45
LSM6P62312 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LSM6P62312 AC068338.2-201ENST00000563278 1430 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms