Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LINC00315P59091 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINC00315P59091 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00315P59091 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00315P59091 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00315P59091 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LINC00315P59091 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
LINC00315P59091 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LINC00315P59091 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LINC00315P59091 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC00315P59091 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00315P59091 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC00315P59091 MIR2861-201ENST00000636310 90 ntBASIC14.65□□□□□ -0.06
LINC00315P59091 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00315P59091 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC00315P59091 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00315P59091 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00315P59091 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00315P59091 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LINC00315P59091 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LINC00315P59091 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LINC00315P59091 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00315P59091 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LINC00315P59091 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.64□□□□□ -0.07
LINC00315P59091 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00315P59091 NTF6G-201ENST00000591094 616 ntBASIC14.64□□□□□ -0.07
LINC00315P59091 AC022517.1-201ENST00000592429 346 ntBASIC14.64□□□□□ -0.07
LINC00315P59091 AL137784.2-201ENST00000607332 1000 ntBASIC14.64□□□□□ -0.07
LINC00315P59091 AC008175.2-201ENST00000612840 297 ntBASIC14.64□□□□□ -0.07
LINC00315P59091 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
LINC00315P59091 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00315P59091 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00315P59091 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00315P59091 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LINC00315P59091 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00315P59091 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00315P59091 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LINC00315P59091 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00315P59091 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LINC00315P59091 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00315P59091 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00315P59091 IKBKGP1-201ENST00000612193 1073 ntBASIC14.63□□□□□ -0.07
LINC00315P59091 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00315P59091 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
LINC00315P59091 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LINC00315P59091 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LINC00315P59091 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00315P59091 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00315P59091 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00315P59091 AC116562.4-201ENST00000641316 2276 ntBASIC14.63□□□□□ -0.07
LINC00315P59091 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00315P59091 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms