Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2BDP58876 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 AL139384.1-201ENST00000612143 3047 ntBASIC15.4■□□□□ 0.06
HIST1H2BDP58876 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 AC093536.1-201ENST00000569153 554 ntBASIC15.4■□□□□ 0.06
HIST1H2BDP58876 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H2BDP58876 AC004687.1-201ENST00000579003 1625 ntBASIC15.39■□□□□ 0.05
HIST1H2BDP58876 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST1H2BDP58876 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 FP325331.1-202ENST00000623531 1380 ntBASIC15.38■□□□□ 0.05
HIST1H2BDP58876 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST1H2BDP58876 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST1H2BDP58876 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms