Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RPPH1-201ENST00000516869 333 ntBASIC20.16■□□□□ 0.82
CLDN2P57739 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.16■□□□□ 0.82
CLDN2P57739 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLDN2P57739 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLDN2P57739 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CLDN2P57739 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN2P57739 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLDN2P57739 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN2P57739 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN2P57739 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN2P57739 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLDN2P57739 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CLDN2P57739 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN2P57739 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN2P57739 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN2P57739 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN2P57739 RN7SL471P-201ENST00000580476 299 ntBASIC20.15■□□□□ 0.82
CLDN2P57739 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN2P57739 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN2P57739 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN2P57739 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 FAM197Y4-202ENST00000622692 608 ntBASIC20.15■□□□□ 0.82
CLDN2P57739 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN2P57739 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN2P57739 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN2P57739 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN2P57739 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLDN2P57739 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLDN2P57739 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLDN2P57739 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN2P57739 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN2P57739 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN2P57739 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN2P57739 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 POM121L13P-201ENST00000422362 380 ntBASIC20.14■□□□□ 0.81
CLDN2P57739 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 RPS2P4-201ENST00000476944 856 ntBASIC20.14■□□□□ 0.81
CLDN2P57739 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN2P57739 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN2P57739 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN2P57739 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN2P57739 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CLDN2P57739 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN2P57739 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLDN2P57739 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 AL049796.1-201ENST00000565336 1766 ntBASIC20.13■□□□□ 0.81
CLDN2P57739 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN2P57739 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN2P57739 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN2P57739 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN2P57739 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN2P57739 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN2P57739 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.13■□□□□ 0.81
CLDN2P57739 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN2P57739 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLDN2P57739 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN2P57739 AC027702.1-201ENST00000563810 1770 ntBASIC20.13■□□□□ 0.81
CLDN2P57739 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLDN2P57739 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN2P57739 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN2P57739 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN2P57739 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN2P57739 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN2P57739 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN2P57739 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN2P57739 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN2P57739 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN2P57739 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms