Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 MYO4YAL029C 4416 nt1.59□□□□□ -2.16
SSU72P53538 SPC110YDR356W 2835 nt1.58□□□□□ -2.16
SSU72P53538 TDA9YML081W 3756 nt1.58□□□□□ -2.16
SSU72P53538 SET2YJL168C 2202 nt1.58□□□□□ -2.16
SSU72P53538 DPB11YJL090C 2295 nt1.58□□□□□ -2.16
SSU72P53538 MET32YDR253C 576 nt1.58□□□□□ -2.16
SSU72P53538 YFR056CYFR056C 369 nt1.58□□□□□ -2.16
SSU72P53538 PRM8YGL053W 714 nt1.58□□□□□ -2.16
SSU72P53538 CIC1YHR052W 1131 nt1.58□□□□□ -2.16
SSU72P53538 TPM2YIL138C 486 nt1.58□□□□□ -2.16
SSU72P53538 APQ13YJL075C 417 nt1.58□□□□□ -2.16
SSU72P53538 SHE2YKL130C 741 nt1.58□□□□□ -2.16
SSU72P53538 YMR230W-AYMR230W-A 189 nt1.58□□□□□ -2.16
SSU72P53538 UBP1YDL122W 2430 nt1.58□□□□□ -2.16
SSU72P53538 AHC2YCR082W 387 nt1.57□□□□□ -2.16
SSU72P53538 SEC31YDL195W 3822 nt1.57□□□□□ -2.16
SSU72P53538 RTR2YDR066C 591 nt1.57□□□□□ -2.16
SSU72P53538 Q0144Q0144 330 nt1.57□□□□□ -2.16
SSU72P53538 TIM10YHR005C-A 282 nt1.57□□□□□ -2.16
SSU72P53538 GIC1YHR061C 945 nt1.57□□□□□ -2.16
SSU72P53538 CMS1YLR003C 876 nt1.57□□□□□ -2.16
SSU72P53538 YLR458WYLR458W 381 nt1.57□□□□□ -2.16
SSU72P53538 SIP18YMR175W 240 nt1.57□□□□□ -2.16
SSU72P53538 PHO80YOL001W 882 nt1.57□□□□□ -2.16
SSU72P53538 MGR1YCL044C 1254 nt1.57□□□□□ -2.16
SSU72P53538 SYH1YPL105C 2550 nt1.57□□□□□ -2.16
SSU72P53538 UBP11YKR098C 2154 nt1.57□□□□□ -2.16
SSU72P53538 CHC1YGL206C 4962 nt1.56□□□□□ -2.16
SSU72P53538 BRO1YPL084W 2535 nt1.56□□□□□ -2.16
SSU72P53538 CRD1YDL142C 852 nt1.56□□□□□ -2.16
SSU72P53538 EMP24YGL200C 612 nt1.56□□□□□ -2.16
SSU72P53538 NCE101YJL205C 162 nt1.56□□□□□ -2.16
SSU72P53538 TFC8YPL007C 1767 nt1.56□□□□□ -2.16
SSU72P53538 MDM32YOR147W 1869 nt1.56□□□□□ -2.16
SSU72P53538 PET309YLR067C 2898 nt1.56□□□□□ -2.16
SSU72P53538 ADR1YDR216W 3972 nt1.56□□□□□ -2.16
SSU72P53538 POL5YEL055C 3069 nt1.55□□□□□ -2.16
SSU72P53538 VPS34YLR240W 2628 nt1.55□□□□□ -2.16
SSU72P53538 PTC5YOR090C 1719 nt1.55□□□□□ -2.16
SSU72P53538 UTP13YLR222C 2454 nt1.55□□□□□ -2.16
SSU72P53538 YCR087C-AYCR087C-A 462 nt1.55□□□□□ -2.16
SSU72P53538 RNR4YGR180C 1038 nt1.55□□□□□ -2.16
SSU72P53538 YIL030W-AYIL030W-A 339 nt1.55□□□□□ -2.16
SSU72P53538 SPC1YJR010C-A 285 nt1.55□□□□□ -2.16
SSU72P53538 RPL37AYLR185W 267 nt1.55□□□□□ -2.16
SSU72P53538 URA10YMR271C 684 nt1.55□□□□□ -2.16
SSU72P53538 RPB11YOL005C 363 nt1.55□□□□□ -2.16
SSU72P53538 SVS1YPL163C 783 nt1.55□□□□□ -2.16
SSU72P53538 LOA1YPR139C 903 nt1.55□□□□□ -2.16
SSU72P53538 TRS20YBR254C 528 nt1.55□□□□□ -2.16
SSU72P53538 YDR341CYDR341C 1824 nt1.54□□□□□ -2.16
SSU72P53538 CDC50YCR094W 1176 nt1.54□□□□□ -2.16
SSU72P53538 RPL31AYDL075W 342 nt1.54□□□□□ -2.16
SSU72P53538 YGL014C-AYGL014C-A 162 nt1.54□□□□□ -2.16
SSU72P53538 RPL40AYIL148W 387 nt1.54□□□□□ -2.16
SSU72P53538 YKL044WYKL044W 321 nt1.54□□□□□ -2.16
SSU72P53538 TEN1YLR010C 483 nt1.54□□□□□ -2.16
SSU72P53538 CCW14YLR390W-A 717 nt1.54□□□□□ -2.16
SSU72P53538 YOR105WYOR105W 327 nt1.54□□□□□ -2.16
SSU72P53538 Q0017Q0017 162 nt1.54□□□□□ -2.16
SSU72P53538 SNU56YDR240C 1479 nt1.54□□□□□ -2.16
SSU72P53538 NCL1YBL024W 2055 nt1.54□□□□□ -2.16
SSU72P53538 YOR019WYOR019W 2193 nt1.54□□□□□ -2.16
SSU72P53538 YDL025W-AYDL025W-A 105 nt1.53□□□□□ -2.16
SSU72P53538 CAJ1YER048C 1176 nt1.53□□□□□ -2.16
SSU72P53538 EAF6YJR082C 342 nt1.53□□□□□ -2.16
SSU72P53538 ICY1YMR195W 384 nt1.53□□□□□ -2.16
SSU72P53538 RPS7BYNL096C 573 nt1.53□□□□□ -2.16
SSU72P53538 YPL197CYPL197C 414 nt1.53□□□□□ -2.16
SSU72P53538 ATG11YPR049C 3537 nt1.53□□□□□ -2.17
SSU72P53538 NAM7YMR080C 2916 nt1.53□□□□□ -2.17
SSU72P53538 PHR1YOR386W 1698 nt1.52□□□□□ -2.17
SSU72P53538 LYS9YNR050C 1341 nt1.52□□□□□ -2.17
SSU72P53538 YDR220CYDR220C 294 nt1.52□□□□□ -2.17
SSU72P53538 YJL127C-BYJL127C-B 159 nt1.52□□□□□ -2.17
SSU72P53538 SNC1YAL030W 354 nt1.52□□□□□ -2.17
SSU72P53538 LCL2YLR104W 396 nt1.52□□□□□ -2.17
SSU72P53538 YMR052C-AYMR052C-A 366 nt1.52□□□□□ -2.17
SSU72P53538 LSM7YNL147W 348 nt1.52□□□□□ -2.17
SSU72P53538 ATX2YOR079C 942 nt1.52□□□□□ -2.17
SSU72P53538 ATP15YPL271W 189 nt1.52□□□□□ -2.17
SSU72P53538 SPO24YPR036W-A 204 nt1.52□□□□□ -2.17
SSU72P53538 KCS1YDR017C 3153 nt1.52□□□□□ -2.17
SSU72P53538 YJL016WYJL016W 1686 nt1.51□□□□□ -2.17
SSU72P53538 CDC53YDL132W 2448 nt1.51□□□□□ -2.17
SSU72P53538 YER068C-AYER068C-A 432 nt1.51□□□□□ -2.17
SSU72P53538 TIM8YJR135W-A 264 nt1.51□□□□□ -2.17
SSU72P53538 YJR140W-AYJR140W-A 150 nt1.51□□□□□ -2.17
SSU72P53538 YOR392WYOR392W 444 nt1.51□□□□□ -2.17
SSU72P53538 SPE1YKL184W 1401 nt1.5□□□□□ -2.17
SSU72P53538 NAN1YPL126W 2691 nt1.5□□□□□ -2.17
SSU72P53538 RKM1YPL208W 1752 nt1.5□□□□□ -2.17
SSU72P53538 YDR194W-AYDR194W-A 153 nt1.5□□□□□ -2.17
SSU72P53538 BNA7YDR428C 786 nt1.5□□□□□ -2.17
SSU72P53538 RPL9AYGL147C 576 nt1.5□□□□□ -2.17
SSU72P53538 YLR031WYLR031W 561 nt1.5□□□□□ -2.17
SSU72P53538 YOL013W-BYOL013W-B 291 nt1.5□□□□□ -2.17
SSU72P53538 RTP1YMR185W 2946 nt1.5□□□□□ -2.17
SSU72P53538 GRR1YJR090C 3456 nt1.49□□□□□ -2.17
SSU72P53538 YDL068WYDL068W 330 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 41.5 ms