Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HCFC1P51610 AC087499.1-201ENST00000418141 1075 ntBASIC17.86■□□□□ 0.45
HCFC1P51610 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
HCFC1P51610 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.86■□□□□ 0.45
HCFC1P51610 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.86■□□□□ 0.45
HCFC1P51610 AC012306.2-201ENST00000609350 630 ntBASIC17.86■□□□□ 0.45
HCFC1P51610 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCFC1P51610 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HCFC1P51610 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
HCFC1P51610 RARRES2P10-201ENST00000564312 460 ntBASIC17.85■□□□□ 0.45
HCFC1P51610 AC005829.2-201ENST00000571422 1056 ntBASIC17.85■□□□□ 0.45
HCFC1P51610 AC113410.3-201ENST00000623366 203 ntBASIC17.85■□□□□ 0.45
HCFC1P51610 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.85■□□□□ 0.45
HCFC1P51610 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HCFC1P51610 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HCFC1P51610 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HCFC1P51610 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HCFC1P51610 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
HCFC1P51610 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HCFC1P51610 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HCFC1P51610 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.84■□□□□ 0.45
HCFC1P51610 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.84■□□□□ 0.45
HCFC1P51610 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.84■□□□□ 0.45
HCFC1P51610 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.84■□□□□ 0.45
HCFC1P51610 KRT18P21-201ENST00000515767 1272 ntBASIC17.84■□□□□ 0.45
HCFC1P51610 MIR4785-201ENST00000585005 73 ntBASIC17.84■□□□□ 0.45
HCFC1P51610 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HCFC1P51610 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.84■□□□□ 0.45
HCFC1P51610 AL135905.2-201ENST00000584934 1404 ntBASIC17.84■□□□□ 0.45
HCFC1P51610 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HCFC1P51610 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.83■□□□□ 0.45
HCFC1P51610 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
HCFC1P51610 NUDT16P1-203ENST00000513809 620 ntBASIC17.83■□□□□ 0.45
HCFC1P51610 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.83■□□□□ 0.45
HCFC1P51610 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.83■□□□□ 0.45
HCFC1P51610 RN7SL850P-201ENST00000579959 291 ntBASIC17.83■□□□□ 0.45
HCFC1P51610 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HCFC1P51610 AC133561.5-201ENST00000635547 218 ntBASIC17.83■□□□□ 0.45
HCFC1P51610 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.83■□□□□ 0.45
HCFC1P51610 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HCFC1P51610 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC1P51610 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.83■□□□□ 0.44
HCFC1P51610 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC1P51610 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC1P51610 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC1P51610 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC1P51610 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HCFC1P51610 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 RCN1P1-201ENST00000400413 996 ntBASIC17.82■□□□□ 0.44
HCFC1P51610 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.82■□□□□ 0.44
HCFC1P51610 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HCFC1P51610 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.82■□□□□ 0.44
HCFC1P51610 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC1P51610 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HCFC1P51610 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
HCFC1P51610 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.82■□□□□ 0.44
HCFC1P51610 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HCFC1P51610 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HCFC1P51610 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HCFC1P51610 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms