Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SSR4P51571 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.72■□□□□ 0.59
SSR4P51571 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 PNMA6B-201ENST00000538162 1200 ntBASIC18.72■□□□□ 0.59
SSR4P51571 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.72■□□□□ 0.59
SSR4P51571 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SSR4P51571 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SSR4P51571 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SSR4P51571 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSR4P51571 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SSR4P51571 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSR4P51571 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
SSR4P51571 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.7■□□□□ 0.58
SSR4P51571 KRT18P29-201ENST00000397031 1267 ntBASIC18.7■□□□□ 0.58
SSR4P51571 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.7■□□□□ 0.58
SSR4P51571 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.7■□□□□ 0.58
SSR4P51571 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 KRT8P36-201ENST00000489121 1440 ntBASIC18.7■□□□□ 0.58
SSR4P51571 AP003097.1-201ENST00000530657 1135 ntBASIC18.7■□□□□ 0.58
SSR4P51571 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SSR4P51571 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.7■□□□□ 0.58
SSR4P51571 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSR4P51571 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SSR4P51571 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.69■□□□□ 0.58
SSR4P51571 AC026366.1-201ENST00000488803 879 ntBASIC18.69■□□□□ 0.58
SSR4P51571 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.69■□□□□ 0.58
SSR4P51571 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.69■□□□□ 0.58
SSR4P51571 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.69■□□□□ 0.58
SSR4P51571 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SSR4P51571 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.69■□□□□ 0.58
SSR4P51571 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSR4P51571 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.69■□□□□ 0.58
SSR4P51571 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSR4P51571 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR4P51571 PLK5-205ENST00000642079 1969 ntBASIC18.68■□□□□ 0.58
SSR4P51571 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSR4P51571 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.68■□□□□ 0.58
SSR4P51571 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.68■□□□□ 0.58
SSR4P51571 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.68■□□□□ 0.58
SSR4P51571 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR4P51571 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.68■□□□□ 0.58
SSR4P51571 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR4P51571 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR4P51571 ITM2C-210ENST00000620962 501 ntBASIC18.68■□□□□ 0.58
SSR4P51571 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.68■□□□□ 0.58
SSR4P51571 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSR4P51571 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSR4P51571 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms