Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLK3P49761 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLK3P49761 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.25■□□□□ 0.67
CLK3P49761 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.25■□□□□ 0.67
CLK3P49761 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.25■□□□□ 0.67
CLK3P49761 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLK3P49761 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK3P49761 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK3P49761 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLK3P49761 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.25■□□□□ 0.67
CLK3P49761 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLK3P49761 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.25■□□□□ 0.67
CLK3P49761 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLK3P49761 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLK3P49761 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK3P49761 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLK3P49761 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK3P49761 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK3P49761 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLK3P49761 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.24■□□□□ 0.67
CLK3P49761 AC016769.1-201ENST00000409132 1010 ntBASIC19.24■□□□□ 0.67
CLK3P49761 KRT18P11-201ENST00000435214 1283 ntBASIC19.24■□□□□ 0.67
CLK3P49761 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLK3P49761 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK3P49761 AC137761.2-201ENST00000561729 223 ntBASIC19.24■□□□□ 0.67
CLK3P49761 AC145350.3-201ENST00000569033 163 ntBASIC19.24■□□□□ 0.67
CLK3P49761 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.24■□□□□ 0.67
CLK3P49761 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK3P49761 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.24■□□□□ 0.67
CLK3P49761 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLK3P49761 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.24■□□□□ 0.67
CLK3P49761 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLK3P49761 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.23■□□□□ 0.67
CLK3P49761 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.23■□□□□ 0.67
CLK3P49761 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.23■□□□□ 0.67
CLK3P49761 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.23■□□□□ 0.67
CLK3P49761 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLK3P49761 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.23■□□□□ 0.67
CLK3P49761 KRT16P2-201ENST00000414673 1423 ntBASIC19.23■□□□□ 0.67
CLK3P49761 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.23■□□□□ 0.67
CLK3P49761 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLK3P49761 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK3P49761 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLK3P49761 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.22■□□□□ 0.67
CLK3P49761 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK3P49761 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.22■□□□□ 0.67
CLK3P49761 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.22■□□□□ 0.67
CLK3P49761 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.22■□□□□ 0.67
CLK3P49761 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLK3P49761 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK3P49761 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLK3P49761 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLK3P49761 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
CLK3P49761 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK3P49761 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK3P49761 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.21■□□□□ 0.67
CLK3P49761 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.21■□□□□ 0.67
CLK3P49761 AC061975.6-201ENST00000579045 1553 ntBASIC19.21■□□□□ 0.67
CLK3P49761 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK3P49761 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK3P49761 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK3P49761 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLK3P49761 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
CLK3P49761 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLK3P49761 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.21■□□□□ 0.67
CLK3P49761 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLK3P49761 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLK3P49761 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLK3P49761 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.2■□□□□ 0.66
CLK3P49761 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.2■□□□□ 0.66
CLK3P49761 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.2■□□□□ 0.66
CLK3P49761 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.2■□□□□ 0.66
CLK3P49761 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.2■□□□□ 0.66
CLK3P49761 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLK3P49761 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLK3P49761 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLK3P49761 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms