Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 ICS2YBR157C 768 nt0.25□□□□□ -2.37
VTH1P40438 PEX34YCL056C 435 nt0.25□□□□□ -2.37
VTH1P40438 POL4YCR014C 1749 nt0.25□□□□□ -2.37
VTH1P40438 NUP188YML103C 4968 nt0.25□□□□□ -2.37
VTH1P40438 NUP120YKL057C 3114 nt0.25□□□□□ -2.37
VTH1P40438 LRS4YDR439W 1044 nt0.24□□□□□ -2.37
VTH1P40438 YEA4YEL004W 1029 nt0.24□□□□□ -2.37
VTH1P40438 HOP2YGL033W 657 nt0.24□□□□□ -2.37
VTH1P40438 GMC2YLR445W 567 nt0.24□□□□□ -2.37
VTH1P40438 YBL029WYBL029W 1131 nt0.24□□□□□ -2.37
VTH1P40438 YMR181CYMR181C 465 nt0.24□□□□□ -2.37
VTH1P40438 YDR355CYDR355C 303 nt0.23□□□□□ -2.37
VTH1P40438 YER088C-AYER088C-A 324 nt0.23□□□□□ -2.37
VTH1P40438 YER189WYER189W 369 nt0.23□□□□□ -2.37
VTH1P40438 EDC1YGL222C 528 nt0.23□□□□□ -2.37
VTH1P40438 CCL1YPR025C 1182 nt0.23□□□□□ -2.37
VTH1P40438 YTH1YPR107C 627 nt0.23□□□□□ -2.37
VTH1P40438 RRP15YPR143W 753 nt0.23□□□□□ -2.37
VTH1P40438 AEP3YPL005W 1821 nt0.23□□□□□ -2.37
VTH1P40438 CDC10YCR002C 969 nt0.23□□□□□ -2.37
VTH1P40438 YGR250CYGR250C 2346 nt0.22□□□□□ -2.37
VTH1P40438 ACA1YER045C 1470 nt0.22□□□□□ -2.37
VTH1P40438 YHL009W-AYHL009W-A 1242 nt0.22□□□□□ -2.37
VTH1P40438 CMC2YBL059C-A 330 nt0.22□□□□□ -2.37
VTH1P40438 YLL007CYLL007C 1998 nt0.21□□□□□ -2.38
VTH1P40438 ATG10YLL042C 504 nt0.21□□□□□ -2.38
VTH1P40438 YET2YMR040W 483 nt0.21□□□□□ -2.38
VTH1P40438 GRX7YBR014C 612 nt0.21□□□□□ -2.38
VTH1P40438 PES4YFR023W 1836 nt0.2□□□□□ -2.38
VTH1P40438 SEC5YDR166C 2916 nt0.2□□□□□ -2.38
VTH1P40438 PXA2YKL188C 2562 nt0.2□□□□□ -2.38
VTH1P40438 YCR015CYCR015C 954 nt0.2□□□□□ -2.38
VTH1P40438 YEL009C-AYEL009C-A 408 nt0.2□□□□□ -2.38
VTH1P40438 SMB1YER029C 591 nt0.2□□□□□ -2.38
VTH1P40438 YFL012W-AYFL012W-A 375 nt0.2□□□□□ -2.38
VTH1P40438 DUO1YGL061C 744 nt0.2□□□□□ -2.38
VTH1P40438 YKL177WYKL177W 339 nt0.2□□□□□ -2.38
VTH1P40438 IRC19YLL033W 693 nt0.2□□□□□ -2.38
VTH1P40438 COF1YLL050C 432 nt0.2□□□□□ -2.38
VTH1P40438 YAR053WYAR053W 297 nt0.2□□□□□ -2.38
VTH1P40438 PRM6YML047C 1059 nt0.2□□□□□ -2.38
VTH1P40438 GLG1YKR058W 1851 nt0.2□□□□□ -2.38
VTH1P40438 CLG1YGL215W 1359 nt0.19□□□□□ -2.38
VTH1P40438 MEI4YER044C-A 1227 nt0.19□□□□□ -2.38
VTH1P40438 ULI1YFR026C 510 nt0.19□□□□□ -2.38
VTH1P40438 EPT1YHR123W 1176 nt0.19□□□□□ -2.38
VTH1P40438 YJL211CYJL211C 444 nt0.19□□□□□ -2.38
VTH1P40438 MER1YNL210W 813 nt0.19□□□□□ -2.38
VTH1P40438 snR13snR13 124 nt0.19□□□□□ -2.38
VTH1P40438 SGO1YOR073W 1773 nt0.19□□□□□ -2.38
VTH1P40438 YDR261W-AYDR261W-A 1317 nt0.19□□□□□ -2.38
VTH1P40438 APC5YOR249C 2058 nt0.18□□□□□ -2.38
VTH1P40438 YDR381C-AYDR381C-A 345 nt0.18□□□□□ -2.38
VTH1P40438 LSM7YNL147W 348 nt0.18□□□□□ -2.38
VTH1P40438 snR191snR191 274 nt0.18□□□□□ -2.38
VTH1P40438 ARK1YNL020C 1917 nt0.18□□□□□ -2.38
VTH1P40438 UTP10YJL109C 5310 nt0.18□□□□□ -2.38
VTH1P40438 COG1YGL223C 1254 nt0.18□□□□□ -2.38
VTH1P40438 YMR324CYMR324C 243 nt0.18□□□□□ -2.38
VTH1P40438 IRC23YOR044W 474 nt0.18□□□□□ -2.38
VTH1P40438 YCL001W-AYCL001W-A 462 nt0.18□□□□□ -2.38
VTH1P40438 YFR056CYFR056C 369 nt0.17□□□□□ -2.38
VTH1P40438 RSM27YGR215W 333 nt0.17□□□□□ -2.38
VTH1P40438 YMR178WYMR178W 825 nt0.17□□□□□ -2.38
VTH1P40438 CYB5YNL111C 363 nt0.17□□□□□ -2.38
VTH1P40438 MRPL50YNR022C 420 nt0.17□□□□□ -2.38
VTH1P40438 YBL100W-BYBL100W-B 5313 nt0.17□□□□□ -2.38
VTH1P40438 HDA3YPR179C 1968 nt0.16□□□□□ -2.38
VTH1P40438 STB6YKL072W 2301 nt0.16□□□□□ -2.38
VTH1P40438 GIC1YHR061C 945 nt0.16□□□□□ -2.38
VTH1P40438 NGL1YOL042W 1092 nt0.16□□□□□ -2.38
VTH1P40438 YOR161W-BYOR161W-B 261 nt0.16□□□□□ -2.38
VTH1P40438 NIP100YPL174C 2607 nt0.16□□□□□ -2.38
VTH1P40438 SWT1YOR166C 1377 nt0.16□□□□□ -2.38
VTH1P40438 AIM9YER080W 1884 nt0.15□□□□□ -2.38
VTH1P40438 DSE2YHR143W 978 nt0.15□□□□□ -2.39
VTH1P40438 YLR290CYLR290C 834 nt0.15□□□□□ -2.39
VTH1P40438 YOR203WYOR203W 354 nt0.15□□□□□ -2.39
VTH1P40438 YPR014CYPR014C 330 nt0.15□□□□□ -2.39
VTH1P40438 KEG1YFR042W 603 nt0.14□□□□□ -2.39
VTH1P40438 ABF2YMR072W 552 nt0.14□□□□□ -2.39
VTH1P40438 RPL32YBL092W 393 nt0.14□□□□□ -2.39
VTH1P40438 DIG2YDR480W 972 nt0.13□□□□□ -2.39
VTH1P40438 YGR064WYGR064W 369 nt0.13□□□□□ -2.39
VTH1P40438 RPS24BYIL069C 408 nt0.13□□□□□ -2.39
VTH1P40438 MRP49YKL167C 414 nt0.13□□□□□ -2.39
VTH1P40438 YDL206WYDL206W 2289 nt0.13□□□□□ -2.39
VTH1P40438 TSA2YDR453C 591 nt0.13□□□□□ -2.39
VTH1P40438 YNL144W-AYNL144W-A 84 nt0.13□□□□□ -2.39
VTH1P40438 YOL050CYOL050C 321 nt0.13□□□□□ -2.39
VTH1P40438 MUB1YMR100W 1863 nt0.12□□□□□ -2.39
VTH1P40438 MZM1YDR493W 372 nt0.12□□□□□ -2.39
VTH1P40438 ECM12YHR021W-A 456 nt0.12□□□□□ -2.39
VTH1P40438 SPC42YKL042W 1092 nt0.12□□□□□ -2.39
VTH1P40438 REX3YLR107W 1215 nt0.12□□□□□ -2.39
VTH1P40438 SPC2YML055W 537 nt0.12□□□□□ -2.39
VTH1P40438 SFM1YOR021C 642 nt0.12□□□□□ -2.39
VTH1P40438 UAF30YOR295W 687 nt0.12□□□□□ -2.39
VTH1P40438 ESP1YGR098C 4893 nt0.12□□□□□ -2.39
VTH1P40438 YGL118CYGL118C 438 nt0.11□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 45.5 ms