Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FEN1P39748 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 AC007225.1-201ENST00000566331 1836 ntBASIC19.35■□□□□ 0.69
FEN1P39748 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.35■□□□□ 0.69
FEN1P39748 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.35■□□□□ 0.69
FEN1P39748 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.35■□□□□ 0.69
FEN1P39748 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.35■□□□□ 0.69
FEN1P39748 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.35■□□□□ 0.69
FEN1P39748 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.35■□□□□ 0.69
FEN1P39748 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FEN1P39748 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FEN1P39748 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
FEN1P39748 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
FEN1P39748 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
FEN1P39748 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
FEN1P39748 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
FEN1P39748 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.34■□□□□ 0.69
FEN1P39748 AC007322.3-201ENST00000426526 701 ntBASIC19.34■□□□□ 0.69
FEN1P39748 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FEN1P39748 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.34■□□□□ 0.69
FEN1P39748 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.34■□□□□ 0.69
FEN1P39748 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
FEN1P39748 IKBKGP1-201ENST00000612193 1073 ntBASIC19.34■□□□□ 0.69
FEN1P39748 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FEN1P39748 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
FEN1P39748 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.34■□□□□ 0.69
FEN1P39748 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.33■□□□□ 0.69
FEN1P39748 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FEN1P39748 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FEN1P39748 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
FEN1P39748 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.33■□□□□ 0.69
FEN1P39748 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FEN1P39748 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
FEN1P39748 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FEN1P39748 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.33■□□□□ 0.68
FEN1P39748 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.33■□□□□ 0.68
FEN1P39748 BID-214ENST00000617586 542 ntTSL 5 BASIC19.33■□□□□ 0.68
FEN1P39748 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
FEN1P39748 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.33■□□□□ 0.68
FEN1P39748 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
FEN1P39748 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
FEN1P39748 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FEN1P39748 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FEN1P39748 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FEN1P39748 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FEN1P39748 FEM1AP1-201ENST00000431297 1995 ntBASIC19.32■□□□□ 0.68
FEN1P39748 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FEN1P39748 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FEN1P39748 CDV3P1-201ENST00000471403 739 ntBASIC19.32■□□□□ 0.68
FEN1P39748 DUX4L16-201ENST00000555130 1264 ntBASIC19.32■□□□□ 0.68
FEN1P39748 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.32■□□□□ 0.68
FEN1P39748 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.32■□□□□ 0.68
FEN1P39748 AC013268.1-206ENST00000638368 961 ntBASIC19.32■□□□□ 0.68
FEN1P39748 AC112229.1-201ENST00000639295 961 ntBASIC19.32■□□□□ 0.68
FEN1P39748 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.32■□□□□ 0.68
FEN1P39748 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.32■□□□□ 0.68
FEN1P39748 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FEN1P39748 AC027702.1-201ENST00000563810 1770 ntBASIC19.32■□□□□ 0.68
FEN1P39748 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FEN1P39748 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
FEN1P39748 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
FEN1P39748 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.31■□□□□ 0.68
FEN1P39748 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.31■□□□□ 0.68
FEN1P39748 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FEN1P39748 AL591742.1-201ENST00000604433 565 ntBASIC19.31■□□□□ 0.68
FEN1P39748 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FEN1P39748 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FEN1P39748 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.31■□□□□ 0.68
FEN1P39748 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FEN1P39748 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms