Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.15■■□□□ 1.78
ATP6V1AP38606 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.15■■□□□ 1.78
ATP6V1AP38606 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP6V1AP38606 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP6V1AP38606 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP6V1AP38606 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ATP6V1AP38606 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
ATP6V1AP38606 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ATP6V1AP38606 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP6V1AP38606 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP6V1AP38606 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP6V1AP38606 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP6V1AP38606 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.14■■□□□ 1.78
ATP6V1AP38606 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
ATP6V1AP38606 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.14■■□□□ 1.77
ATP6V1AP38606 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ATP6V1AP38606 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
ATP6V1AP38606 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
ATP6V1AP38606 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP6V1AP38606 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP6V1AP38606 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.13■■□□□ 1.77
ATP6V1AP38606 AF186192.3-201ENST00000583427 947 ntBASIC26.13■■□□□ 1.77
ATP6V1AP38606 CD177P1-201ENST00000606252 935 ntBASIC26.13■■□□□ 1.77
ATP6V1AP38606 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ATP6V1AP38606 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ATP6V1AP38606 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ATP6V1AP38606 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ATP6V1AP38606 HTR7P1-201ENST00000538670 1336 ntBASIC26.13■■□□□ 1.77
ATP6V1AP38606 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V1AP38606 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V1AP38606 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V1AP38606 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V1AP38606 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V1AP38606 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V1AP38606 TMPOP1-202ENST00000424642 1267 ntBASIC26.12■■□□□ 1.77
ATP6V1AP38606 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.12■■□□□ 1.77
ATP6V1AP38606 AL355355.2-201ENST00000442321 338 ntBASIC26.12■■□□□ 1.77
ATP6V1AP38606 AL445228.2-201ENST00000605589 952 ntBASIC26.12■■□□□ 1.77
ATP6V1AP38606 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.12■■□□□ 1.77
ATP6V1AP38606 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.12■■□□□ 1.77
ATP6V1AP38606 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP6V1AP38606 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP6V1AP38606 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.11■■□□□ 1.77
ATP6V1AP38606 MMP23A-201ENST00000234610 1017 ntBASIC26.11■■□□□ 1.77
ATP6V1AP38606 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP6V1AP38606 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC26.11■■□□□ 1.77
ATP6V1AP38606 RN7SL850P-201ENST00000579959 291 ntBASIC26.11■■□□□ 1.77
ATP6V1AP38606 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ATP6V1AP38606 AL121829.2-201ENST00000620908 328 ntBASIC26.11■■□□□ 1.77
ATP6V1AP38606 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.11■■□□□ 1.77
ATP6V1AP38606 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP6V1AP38606 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
ATP6V1AP38606 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ATP6V1AP38606 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ATP6V1AP38606 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ATP6V1AP38606 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ATP6V1AP38606 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.1■■□□□ 1.77
ATP6V1AP38606 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ATP6V1AP38606 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26.1■■□□□ 1.77
ATP6V1AP38606 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
ATP6V1AP38606 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
ATP6V1AP38606 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.1■■□□□ 1.77
ATP6V1AP38606 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
ATP6V1AP38606 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 KRT16P5-201ENST00000455284 522 ntBASIC26.09■■□□□ 1.77
ATP6V1AP38606 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 RPS15-203ENST00000586096 570 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.09■■□□□ 1.77
ATP6V1AP38606 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP6V1AP38606 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
ATP6V1AP38606 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ATP6V1AP38606 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ATP6V1AP38606 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ATP6V1AP38606 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.08■■□□□ 1.77
ATP6V1AP38606 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ATP6V1AP38606 AC124283.5-201ENST00000624661 1809 ntBASIC26.07■■□□□ 1.76
ATP6V1AP38606 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.07■■□□□ 1.76
ATP6V1AP38606 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ATP6V1AP38606 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
ATP6V1AP38606 FAM197Y1-201ENST00000421178 764 ntBASIC26.07■■□□□ 1.76
ATP6V1AP38606 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.07■■□□□ 1.76
ATP6V1AP38606 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.07■■□□□ 1.76
ATP6V1AP38606 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.07■■□□□ 1.76
ATP6V1AP38606 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms