Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PDE6BP35913 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
PDE6BP35913 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.29■■□□□ 1.64
PDE6BP35913 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDE6BP35913 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE6BP35913 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PDE6BP35913 NBPF21P-201ENST00000425093 1451 ntBASIC25.28■■□□□ 1.64
PDE6BP35913 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PDE6BP35913 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDE6BP35913 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.28■■□□□ 1.64
PDE6BP35913 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.28■■□□□ 1.64
PDE6BP35913 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.28■■□□□ 1.64
PDE6BP35913 AL049597.2-201ENST00000565575 961 ntBASIC25.28■■□□□ 1.64
PDE6BP35913 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDE6BP35913 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.28■■□□□ 1.64
PDE6BP35913 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.28■■□□□ 1.64
PDE6BP35913 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
PDE6BP35913 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.28■■□□□ 1.64
PDE6BP35913 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDE6BP35913 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.28■■□□□ 1.64
PDE6BP35913 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDE6BP35913 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.27■■□□□ 1.64
PDE6BP35913 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDE6BP35913 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.27■■□□□ 1.64
PDE6BP35913 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDE6BP35913 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.27■■□□□ 1.64
PDE6BP35913 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.27■■□□□ 1.64
PDE6BP35913 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.27■■□□□ 1.64
PDE6BP35913 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.27■■□□□ 1.64
PDE6BP35913 AC073195.1-201ENST00000607241 877 ntBASIC25.27■■□□□ 1.64
PDE6BP35913 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.27■■□□□ 1.64
PDE6BP35913 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDE6BP35913 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PDE6BP35913 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PDE6BP35913 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.27■■□□□ 1.64
PDE6BP35913 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDE6BP35913 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.27■■□□□ 1.64
PDE6BP35913 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDE6BP35913 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE6BP35913 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDE6BP35913 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE6BP35913 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
PDE6BP35913 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.26■■□□□ 1.63
PDE6BP35913 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDE6BP35913 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.26■■□□□ 1.63
PDE6BP35913 MIR6786-201ENST00000616843 113 ntBASIC25.26■■□□□ 1.63
PDE6BP35913 AC005363.2-201ENST00000618631 242 ntBASIC25.26■■□□□ 1.63
PDE6BP35913 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDE6BP35913 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDE6BP35913 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.26■■□□□ 1.63
PDE6BP35913 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDE6BP35913 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDE6BP35913 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.26■■□□□ 1.63
PDE6BP35913 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE6BP35913 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.25■■□□□ 1.63
PDE6BP35913 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.25■■□□□ 1.63
PDE6BP35913 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE6BP35913 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE6BP35913 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.25■■□□□ 1.63
PDE6BP35913 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE6BP35913 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDE6BP35913 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.24■■□□□ 1.63
PDE6BP35913 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDE6BP35913 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
PDE6BP35913 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PDE6BP35913 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.24■■□□□ 1.63
PDE6BP35913 AC023632.3-201ENST00000521633 145 ntBASIC25.24■■□□□ 1.63
PDE6BP35913 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.24■■□□□ 1.63
PDE6BP35913 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PDE6BP35913 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.24■■□□□ 1.63
PDE6BP35913 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDE6BP35913 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
PDE6BP35913 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.23■■□□□ 1.63
PDE6BP35913 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
PDE6BP35913 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDE6BP35913 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDE6BP35913 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDE6BP35913 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDE6BP35913 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDE6BP35913 RBM17P1-201ENST00000453646 1190 ntBASIC25.23■■□□□ 1.63
PDE6BP35913 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.23■■□□□ 1.63
PDE6BP35913 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.23■■□□□ 1.63
PDE6BP35913 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.23■■□□□ 1.63
PDE6BP35913 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDE6BP35913 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDE6BP35913 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.23■■□□□ 1.63
PDE6BP35913 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PDE6BP35913 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDE6BP35913 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.22■■□□□ 1.63
PDE6BP35913 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PDE6BP35913 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDE6BP35913 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PDE6BP35913 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
PDE6BP35913 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.22■■□□□ 1.63
PDE6BP35913 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PDE6BP35913 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.22■■□□□ 1.63
PDE6BP35913 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.22■■□□□ 1.63
PDE6BP35913 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
PDE6BP35913 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDE6BP35913 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms