Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RFC4P35249 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RFC4P35249 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.78■■□□□ 1.72
RFC4P35249 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RFC4P35249 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RFC4P35249 AC092865.7-201ENST00000641832 219 ntBASIC25.78■■□□□ 1.72
RFC4P35249 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
RFC4P35249 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.78■■□□□ 1.72
RFC4P35249 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.78■■□□□ 1.72
RFC4P35249 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RFC4P35249 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.77■■□□□ 1.72
RFC4P35249 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.77■■□□□ 1.72
RFC4P35249 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.77■■□□□ 1.72
RFC4P35249 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.77■■□□□ 1.72
RFC4P35249 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
RFC4P35249 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
RFC4P35249 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
RFC4P35249 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.77■■□□□ 1.72
RFC4P35249 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFC4P35249 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.76■■□□□ 1.72
RFC4P35249 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.76■■□□□ 1.71
RFC4P35249 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RFC4P35249 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RFC4P35249 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.76■■□□□ 1.71
RFC4P35249 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.76■■□□□ 1.71
RFC4P35249 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RFC4P35249 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.76■■□□□ 1.71
RFC4P35249 MIR6786-201ENST00000616843 113 ntBASIC25.76■■□□□ 1.71
RFC4P35249 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.76■■□□□ 1.71
RFC4P35249 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.76■■□□□ 1.71
RFC4P35249 AL590326.2-201ENST00000625139 305 ntBASIC25.76■■□□□ 1.71
RFC4P35249 NBPF21P-201ENST00000425093 1451 ntBASIC25.76■■□□□ 1.71
RFC4P35249 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.76■■□□□ 1.71
RFC4P35249 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.76■■□□□ 1.71
RFC4P35249 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RFC4P35249 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.76■■□□□ 1.71
RFC4P35249 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.75■■□□□ 1.71
RFC4P35249 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.75■■□□□ 1.71
RFC4P35249 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.75■■□□□ 1.71
RFC4P35249 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.75■■□□□ 1.71
RFC4P35249 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 AC145285.6-201ENST00000604632 637 ntBASIC25.75■■□□□ 1.71
RFC4P35249 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.75■■□□□ 1.71
RFC4P35249 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
RFC4P35249 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RFC4P35249 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.75■■□□□ 1.71
RFC4P35249 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RFC4P35249 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
RFC4P35249 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.74■■□□□ 1.71
RFC4P35249 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RFC4P35249 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RFC4P35249 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.74■■□□□ 1.71
RFC4P35249 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
RFC4P35249 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.74■■□□□ 1.71
RFC4P35249 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RFC4P35249 AC005363.2-201ENST00000618631 242 ntBASIC25.74■■□□□ 1.71
RFC4P35249 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RFC4P35249 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RFC4P35249 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.73■■□□□ 1.71
RFC4P35249 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.73■■□□□ 1.71
RFC4P35249 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.73■■□□□ 1.71
RFC4P35249 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RFC4P35249 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.73■■□□□ 1.71
RFC4P35249 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.73■■□□□ 1.71
RFC4P35249 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFC4P35249 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.73■■□□□ 1.71
RFC4P35249 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.72■■□□□ 1.71
RFC4P35249 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RFC4P35249 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RFC4P35249 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RFC4P35249 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.72■■□□□ 1.71
RFC4P35249 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.72■■□□□ 1.71
RFC4P35249 AC073195.1-201ENST00000607241 877 ntBASIC25.72■■□□□ 1.71
RFC4P35249 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.72■■□□□ 1.71
RFC4P35249 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.72■■□□□ 1.71
RFC4P35249 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.72■■□□□ 1.71
RFC4P35249 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
RFC4P35249 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFC4P35249 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.71■■□□□ 1.71
RFC4P35249 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
RFC4P35249 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RFC4P35249 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RFC4P35249 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RFC4P35249 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RFC4P35249 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms