Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EPHA3P29320 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
EPHA3P29320 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
EPHA3P29320 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EPHA3P29320 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EPHA3P29320 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
EPHA3P29320 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.79■□□□□ 0.76
EPHA3P29320 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.79■□□□□ 0.76
EPHA3P29320 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.79■□□□□ 0.76
EPHA3P29320 AC008175.2-201ENST00000612840 297 ntBASIC19.79■□□□□ 0.76
EPHA3P29320 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EPHA3P29320 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
EPHA3P29320 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EPHA3P29320 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.79■□□□□ 0.76
EPHA3P29320 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
EPHA3P29320 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
EPHA3P29320 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
EPHA3P29320 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHA3P29320 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHA3P29320 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EPHA3P29320 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
EPHA3P29320 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
EPHA3P29320 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EPHA3P29320 POU5F1P4-201ENST00000413175 1085 ntBASIC19.78■□□□□ 0.76
EPHA3P29320 AP001330.3-201ENST00000520123 633 ntBASIC19.78■□□□□ 0.76
EPHA3P29320 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.78■□□□□ 0.76
EPHA3P29320 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
EPHA3P29320 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.78■□□□□ 0.76
EPHA3P29320 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
EPHA3P29320 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
EPHA3P29320 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.78■□□□□ 0.76
EPHA3P29320 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHA3P29320 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.77■□□□□ 0.76
EPHA3P29320 PBX2P1-201ENST00000493219 1291 ntBASIC19.77■□□□□ 0.76
EPHA3P29320 AC012414.1-201ENST00000556676 535 ntBASIC19.77■□□□□ 0.76
EPHA3P29320 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.77■□□□□ 0.76
EPHA3P29320 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
EPHA3P29320 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHA3P29320 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
EPHA3P29320 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
EPHA3P29320 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
EPHA3P29320 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
EPHA3P29320 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.77■□□□□ 0.75
EPHA3P29320 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.76■□□□□ 0.75
EPHA3P29320 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
EPHA3P29320 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
EPHA3P29320 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
EPHA3P29320 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.76■□□□□ 0.75
EPHA3P29320 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.76■□□□□ 0.75
EPHA3P29320 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.76■□□□□ 0.75
EPHA3P29320 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.76■□□□□ 0.75
EPHA3P29320 TPRG1LP1-201ENST00000598702 760 ntBASIC19.76■□□□□ 0.75
EPHA3P29320 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
EPHA3P29320 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHA3P29320 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHA3P29320 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHA3P29320 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 AC096631.2-201ENST00000436136 790 ntBASIC19.75■□□□□ 0.75
EPHA3P29320 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 MIR2861-201ENST00000636310 90 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms