Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.21■□□□□ 0.67
NCK1P16333 AC008764.7-201ENST00000593779 1081 ntBASIC19.21■□□□□ 0.67
NCK1P16333 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NCK1P16333 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 TSPY26P-201ENST00000476365 1326 ntBASIC19.21■□□□□ 0.67
NCK1P16333 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCK1P16333 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
NCK1P16333 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.2■□□□□ 0.66
NCK1P16333 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.2■□□□□ 0.66
NCK1P16333 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NCK1P16333 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.2■□□□□ 0.66
NCK1P16333 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
NCK1P16333 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NCK1P16333 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NCK1P16333 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.19■□□□□ 0.66
NCK1P16333 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NCK1P16333 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NCK1P16333 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.19■□□□□ 0.66
NCK1P16333 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
NCK1P16333 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCK1P16333 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.18■□□□□ 0.66
NCK1P16333 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NCK1P16333 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
NCK1P16333 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
NCK1P16333 AL136162.1-201ENST00000607711 1078 ntBASIC19.18■□□□□ 0.66
NCK1P16333 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NCK1P16333 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NCK1P16333 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCK1P16333 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
NCK1P16333 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCK1P16333 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.17■□□□□ 0.66
NCK1P16333 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.17■□□□□ 0.66
NCK1P16333 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.17■□□□□ 0.66
NCK1P16333 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCK1P16333 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.17■□□□□ 0.66
NCK1P16333 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NCK1P16333 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NCK1P16333 AC099791.1-201ENST00000416440 715 ntBASIC19.17■□□□□ 0.66
NCK1P16333 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.17■□□□□ 0.66
NCK1P16333 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.17■□□□□ 0.66
NCK1P16333 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.17■□□□□ 0.66
NCK1P16333 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCK1P16333 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCK1P16333 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCK1P16333 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCK1P16333 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCK1P16333 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NCK1P16333 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NCK1P16333 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCK1P16333 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms