Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHRNB1P11230 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNB1P11230 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.73■□□□□ 0.91
CHRNB1P11230 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNB1P11230 RCN1P1-201ENST00000400413 996 ntBASIC20.73■□□□□ 0.91
CHRNB1P11230 AL390719.1-204ENST00000412397 1219 ntBASIC20.73■□□□□ 0.91
CHRNB1P11230 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.73■□□□□ 0.91
CHRNB1P11230 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.73■□□□□ 0.91
CHRNB1P11230 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.73■□□□□ 0.91
CHRNB1P11230 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.73■□□□□ 0.91
CHRNB1P11230 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.73■□□□□ 0.91
CHRNB1P11230 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.73■□□□□ 0.91
CHRNB1P11230 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.73■□□□□ 0.91
CHRNB1P11230 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNB1P11230 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNB1P11230 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHRNB1P11230 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHRNB1P11230 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHRNB1P11230 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNB1P11230 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHRNB1P11230 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHRNB1P11230 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNB1P11230 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.72■□□□□ 0.91
CHRNB1P11230 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.72■□□□□ 0.91
CHRNB1P11230 AL356652.1-201ENST00000615962 565 ntBASIC20.72■□□□□ 0.91
CHRNB1P11230 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNB1P11230 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNB1P11230 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNB1P11230 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.72■□□□□ 0.91
CHRNB1P11230 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNB1P11230 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHRNB1P11230 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNB1P11230 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHRNB1P11230 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNB1P11230 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNB1P11230 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNB1P11230 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.71■□□□□ 0.91
CHRNB1P11230 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNB1P11230 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNB1P11230 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CHRNB1P11230 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.71■□□□□ 0.91
CHRNB1P11230 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHRNB1P11230 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.71■□□□□ 0.91
CHRNB1P11230 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNB1P11230 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNB1P11230 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHRNB1P11230 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHRNB1P11230 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHRNB1P11230 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.7■□□□□ 0.9
CHRNB1P11230 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHRNB1P11230 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHRNB1P11230 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.69■□□□□ 0.9
CHRNB1P11230 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHRNB1P11230 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.69■□□□□ 0.9
CHRNB1P11230 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.69■□□□□ 0.9
CHRNB1P11230 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.69■□□□□ 0.9
CHRNB1P11230 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.69■□□□□ 0.9
CHRNB1P11230 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHRNB1P11230 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CHRNB1P11230 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNB1P11230 AL121603.2-201ENST00000557373 2117 ntBASIC20.68■□□□□ 0.9
CHRNB1P11230 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNB1P11230 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNB1P11230 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNB1P11230 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CHRNB1P11230 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNB1P11230 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHRNB1P11230 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNB1P11230 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
CHRNB1P11230 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNB1P11230 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.68■□□□□ 0.9
CHRNB1P11230 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHRNB1P11230 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.68■□□□□ 0.9
CHRNB1P11230 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRNB1P11230 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNB1P11230 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNB1P11230 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms