Protein–RNA interactions for Protein: P0CX35

RPS4A, 40S ribosomal protein S4-A, yeastyeast

Known RBP Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS4AP0CX35 XRN1YGL173C 4587 nt3.28□□□□□ -1.88
RPS4AP0CX35 GCD6YDR211W 2139 nt3.28□□□□□ -1.89
RPS4AP0CX35 PKH1YDR490C 2301 nt3.27□□□□□ -1.89
RPS4AP0CX35 APC11YDL008W 498 nt3.27□□□□□ -1.89
RPS4AP0CX35 RPS27AYKL156W 249 nt3.27□□□□□ -1.89
RPS4AP0CX35 PCC1YKR095W-A 267 nt3.27□□□□□ -1.89
RPS4AP0CX35 YMR324CYMR324C 243 nt3.27□□□□□ -1.89
RPS4AP0CX35 STU2YLR045C 2667 nt3.27□□□□□ -1.89
RPS4AP0CX35 ZDS2YML109W 2829 nt3.27□□□□□ -1.89
RPS4AP0CX35 STU1YBL034C 4542 nt3.27□□□□□ -1.89
RPS4AP0CX35 SSE1YPL106C 2082 nt3.26□□□□□ -1.89
RPS4AP0CX35 RAD5YLR032W 3510 nt3.26□□□□□ -1.89
RPS4AP0CX35 RBK1YCR036W 1002 nt3.26□□□□□ -1.89
RPS4AP0CX35 YDR524C-AYDR524C-A 120 nt3.26□□□□□ -1.89
RPS4AP0CX35 RPL38YLR325C 237 nt3.26□□□□□ -1.89
RPS4AP0CX35 MRPL33YMR286W 261 nt3.26□□□□□ -1.89
RPS4AP0CX35 GIS2YNL255C 462 nt3.26□□□□□ -1.89
RPS4AP0CX35 YOR015WYOR015W 360 nt3.26□□□□□ -1.89
RPS4AP0CX35 COG3YER157W 2406 nt3.26□□□□□ -1.89
RPS4AP0CX35 PHO2YDL106C 1680 nt3.26□□□□□ -1.89
RPS4AP0CX35 AI5_ALPHAQ0070 1893 nt3.26□□□□□ -1.89
RPS4AP0CX35 MDM20YOL076W 2391 nt3.25□□□□□ -1.89
RPS4AP0CX35 QCR7YDR529C 384 nt3.25□□□□□ -1.89
RPS4AP0CX35 YIL059CYIL059C 366 nt3.25□□□□□ -1.89
RPS4AP0CX35 RRT15YLR162W-A 189 nt3.25□□□□□ -1.89
RPS4AP0CX35 CSE2YNR010W 450 nt3.25□□□□□ -1.89
RPS4AP0CX35 RPL20BYOR312C 519 nt3.25□□□□□ -1.89
RPS4AP0CX35 TMA108YIL137C 2841 nt3.25□□□□□ -1.89
RPS4AP0CX35 RPA135YPR010C 3612 nt3.24□□□□□ -1.89
RPS4AP0CX35 RPS21AYKR057W 264 nt3.24□□□□□ -1.89
RPS4AP0CX35 YTA7YGR270W 4140 nt3.24□□□□□ -1.89
RPS4AP0CX35 MSR1YHR091C 1932 nt3.24□□□□□ -1.89
RPS4AP0CX35 VBA4YDR119W 2307 nt3.24□□□□□ -1.89
RPS4AP0CX35 HDA3YPR179C 1968 nt3.23□□□□□ -1.89
RPS4AP0CX35 SEC15YGL233W 2733 nt3.23□□□□□ -1.89
RPS4AP0CX35 VTC1YER072W 390 nt3.23□□□□□ -1.89
RPS4AP0CX35 YMR31YFR049W 372 nt3.23□□□□□ -1.89
RPS4AP0CX35 VTC4YJL012C 2166 nt3.23□□□□□ -1.89
RPS4AP0CX35 YBR224WYBR224W 516 nt3.23□□□□□ -1.89
RPS4AP0CX35 AUS1YOR011W 4185 nt3.23□□□□□ -1.89
RPS4AP0CX35 NCL1YBL024W 2055 nt3.23□□□□□ -1.89
RPS4AP0CX35 RSF2YJR127C 4143 nt3.22□□□□□ -1.89
RPS4AP0CX35 YDR193WYDR193W 399 nt3.22□□□□□ -1.89
RPS4AP0CX35 YLR154W-EYLR154W-E 204 nt3.22□□□□□ -1.89
RPS4AP0CX35 MIT1YEL007W 2001 nt3.22□□□□□ -1.89
RPS4AP0CX35 AKR1YDR264C 2295 nt3.22□□□□□ -1.89
RPS4AP0CX35 YEL025CYEL025C 3567 nt3.22□□□□□ -1.89
RPS4AP0CX35 FLO5YHR211W 3228 nt3.21□□□□□ -1.9
RPS4AP0CX35 YFL065CYFL065C 309 nt3.21□□□□□ -1.9
RPS4AP0CX35 LSO2YGR169C-A 279 nt3.21□□□□□ -1.9
RPS4AP0CX35 UPS1YLR193C 528 nt3.21□□□□□ -1.9
RPS4AP0CX35 GOT1YMR292W 417 nt3.21□□□□□ -1.9
RPS4AP0CX35 REG1YDR028C 3045 nt3.2□□□□□ -1.9
RPS4AP0CX35 DRS2YAL026C 4068 nt3.2□□□□□ -1.9
RPS4AP0CX35 PSF1YDR013W 627 nt3.2□□□□□ -1.9
RPS4AP0CX35 YDR464C-AYDR464C-A 189 nt3.2□□□□□ -1.9
RPS4AP0CX35 PAU10YDR542W 363 nt3.2□□□□□ -1.9
RPS4AP0CX35 PAU11YGL261C 363 nt3.2□□□□□ -1.9
RPS4AP0CX35 PAU4YLR461W 363 nt3.2□□□□□ -1.9
RPS4AP0CX35 YMR122W-AYMR122W-A 255 nt3.2□□□□□ -1.9
RPS4AP0CX35 YNL097C-BYNL097C-B 123 nt3.2□□□□□ -1.9
RPS4AP0CX35 LCD1YDR499W 2244 nt3.2□□□□□ -1.9
RPS4AP0CX35 CDC20YGL116W 1833 nt3.19□□□□□ -1.9
RPS4AP0CX35 SET1YHR119W 3243 nt3.19□□□□□ -1.9
RPS4AP0CX35 YGL024WYGL024W 336 nt3.19□□□□□ -1.9
RPS4AP0CX35 SMD1YGR074W 441 nt3.19□□□□□ -1.9
RPS4AP0CX35 LRE1YCL051W 1752 nt3.19□□□□□ -1.9
RPS4AP0CX35 RAM2YKL019W 951 nt3.18□□□□□ -1.9
RPS4AP0CX35 YML007C-AYML007C-A 111 nt3.18□□□□□ -1.9
RPS4AP0CX35 snR46snR46 197 nt3.18□□□□□ -1.9
RPS4AP0CX35 MSH2YOL090W 2895 nt3.18□□□□□ -1.9
RPS4AP0CX35 RLF2YPR018W 1821 nt3.18□□□□□ -1.9
RPS4AP0CX35 FAS1YKL182W 6156 nt3.18□□□□□ -1.9
RPS4AP0CX35 ARO1YDR127W 4767 nt3.18□□□□□ -1.9
RPS4AP0CX35 KAR3YPR141C 2190 nt3.18□□□□□ -1.9
RPS4AP0CX35 PDE2YOR360C 1581 nt3.17□□□□□ -1.9
RPS4AP0CX35 YGL217CYGL217C 342 nt3.17□□□□□ -1.9
RPS4AP0CX35 YOR376WYOR376W 369 nt3.17□□□□□ -1.9
RPS4AP0CX35 PFK26YIL107C 2484 nt3.17□□□□□ -1.9
RPS4AP0CX35 GIN4YDR507C 3429 nt3.17□□□□□ -1.9
RPS4AP0CX35 tC(GCA)BtC(GCA)B 72 nt3.16□□□□□ -1.9
RPS4AP0CX35 tC(GCA)GtC(GCA)G 72 nt3.16□□□□□ -1.9
RPS4AP0CX35 tC(GCA)P1tC(GCA)P1 72 nt3.16□□□□□ -1.9
RPS4AP0CX35 tC(GCA)P2tC(GCA)P2 72 nt3.16□□□□□ -1.9
RPS4AP0CX35 YGL069CYGL069C 465 nt3.16□□□□□ -1.9
RPS4AP0CX35 YLR255CYLR255C 354 nt3.16□□□□□ -1.9
RPS4AP0CX35 YBR182C-AYBR182C-A 195 nt3.16□□□□□ -1.9
RPS4AP0CX35 MET10YFR030W 3108 nt3.16□□□□□ -1.9
RPS4AP0CX35 NUP120YKL057C 3114 nt3.16□□□□□ -1.9
RPS4AP0CX35 PEX1YKL197C 3132 nt3.16□□□□□ -1.9
RPS4AP0CX35 EXO84YBR102C 2262 nt3.16□□□□□ -1.9
RPS4AP0CX35 DFG16YOR030W 1860 nt3.16□□□□□ -1.9
RPS4AP0CX35 REC8YPR007C 2043 nt3.15□□□□□ -1.9
RPS4AP0CX35 YDR034C-DYDR034C-D 5313 nt3.15□□□□□ -1.9
RPS4AP0CX35 VPS3YDR495C 3036 nt3.15□□□□□ -1.9
RPS4AP0CX35 CUL3YGR003W 2235 nt3.15□□□□□ -1.9
RPS4AP0CX35 YDR426CYDR426C 378 nt3.15□□□□□ -1.91
RPS4AP0CX35 tK(UUU)DtK(UUU)D 73 nt3.15□□□□□ -1.91
RPS4AP0CX35 tK(UUU)G1tK(UUU)G1 73 nt3.15□□□□□ -1.91
RPS4AP0CX35 tK(UUU)G2tK(UUU)G2 73 nt3.15□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 35.4 ms