Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 BNR1YIL159W 4128 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YDR098C-BYDR098C-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YDR210C-DYDR210C-D 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YDR316W-BYDR316W-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YDR365W-BYDR365W-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YER138CYER138C 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YER160CYER160C 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YGR038C-BYGR038C-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YGR161C-DYGR161C-D 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YJR027WYJR027W 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YLR157C-BYLR157C-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YML039WYML039W 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YML045WYML045W 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YMR050CYMR050C 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YOL103W-BYOL103W-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YBR012W-BYBR012W-B 5271 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YOR142W-BYOR142W-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YPL257W-BYPL257W-B 5268 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YPR158W-BYPR158W-B 5271 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 DIE2YGR227W 1578 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YAR047CYAR047C 321 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YLR287CYLR287C 1068 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 RPS29AYLR388W 171 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YMR324CYMR324C 243 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 MRPL50YNR022C 420 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 YBR085C-AYBR085C-A 258 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 FKS3YMR306W 5358 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 SAP1YER047C 2694 nt2.45□□□□□ -2.02
TY2A-LR1P0C2J4 FAR11YNL127W 2862 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 SLN1YIL147C 3663 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 SRO77YBL106C 3033 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 GIS1YDR096W 2685 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 tW(CCA)G1tW(CCA)G1 72 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 tW(CCA)G2tW(CCA)G2 72 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 tW(CCA)JtW(CCA)J 72 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 RPS24BYIL069C 408 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 tW(CCA)KtW(CCA)K 72 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 tW(CCA)MtW(CCA)M 72 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 tW(CCA)PtW(CCA)P 72 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 RPS18BYML026C 441 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 YPR203WYPR203W 309 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 MRD1YPR112C 2664 nt2.44□□□□□ -2.02
TY2A-LR1P0C2J4 CBS1YDL069C 690 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 TWF1YGR080W 999 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 YHR028W-AYHR028W-A 321 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 YHR032W-AYHR032W-A 180 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 SEC22YLR268W 645 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 BSC3YLR465C 309 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 UBC7YMR022W 498 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 YOR029WYOR029W 336 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 RRP6YOR001W 2202 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 PDR3YBL005W 2931 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 TAE2YPL009C 3117 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 CDC24YAL041W 2565 nt2.43□□□□□ -2.02
TY2A-LR1P0C2J4 ISW1YBR245C 3390 nt2.42□□□□□ -2.02
TY2A-LR1P0C2J4 URM1YIL008W 300 nt2.42□□□□□ -2.02
TY2A-LR1P0C2J4 KAR3YPR141C 2190 nt2.42□□□□□ -2.02
TY2A-LR1P0C2J4 TRS130YMR218C 3309 nt2.41□□□□□ -2.02
TY2A-LR1P0C2J4 YER121WYER121W 345 nt2.41□□□□□ -2.02
TY2A-LR1P0C2J4 YOR146WYOR146W 306 nt2.41□□□□□ -2.02
TY2A-LR1P0C2J4 BFA1YJR053W 1725 nt2.41□□□□□ -2.02
TY2A-LR1P0C2J4 JSN1YJR091C 3276 nt2.41□□□□□ -2.02
TY2A-LR1P0C2J4 SOK2YMR016C 2358 nt2.41□□□□□ -2.02
TY2A-LR1P0C2J4 NUM1YDR150W 8247 nt2.4□□□□□ -2.02
TY2A-LR1P0C2J4 SWT1YOR166C 1377 nt2.4□□□□□ -2.02
TY2A-LR1P0C2J4 KAP123YER110C 3342 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 CDC50YCR094W 1176 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 LSO2YGR169C-A 279 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 NOP10YHR072W-A 177 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 TMA22YJR014W 597 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 YLR434CYLR434C 384 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 YMR320WYMR320W 306 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 LCL1YPL056C 306 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 RTC6YPL183W-A 282 nt2.4□□□□□ -2.03
TY2A-LR1P0C2J4 GNT1YOR320C 1476 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 snR70snR70 164 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 SMD1YGR074W 441 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 FCF2YLR051C 654 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 YBL071CYBL071C 309 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 YPR146CYPR146C 330 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 BUB1YGR188C 3066 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 YKU80YMR106C 1890 nt2.39□□□□□ -2.03
TY2A-LR1P0C2J4 ATG31YDR022C 591 nt2.38□□□□□ -2.03
TY2A-LR1P0C2J4 YER023C-AYER023C-A 213 nt2.38□□□□□ -2.03
TY2A-LR1P0C2J4 MSL1YIR009W 336 nt2.38□□□□□ -2.03
TY2A-LR1P0C2J4 EMC6YLL014W 327 nt2.38□□□□□ -2.03
TY2A-LR1P0C2J4 NEW1YPL226W 3591 nt2.38□□□□□ -2.03
TY2A-LR1P0C2J4 NUP100YKL068W 2880 nt2.38□□□□□ -2.03
TY2A-LR1P0C2J4 NUP120YKL057C 3114 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 VPS35YJL154C 2835 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 AFI1YOR129C 2682 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 ARP8YOR141C 2646 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 YDR524W-CYDR524W-C 90 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 HIT1YJR055W 495 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 YBR012CYBR012C 420 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 SNC2YOR327C 348 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 KRE33YNL132W 3171 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 SGD1YLR336C 2700 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 ORC2YBR060C 1863 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 EDS1YBR033W 2760 nt2.37□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 63.9 ms