Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFRP08138 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NGFRP08138 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NGFRP08138 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFRP08138 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFRP08138 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.71■□□□□ 0.59
NGFRP08138 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 AC010980.2-201ENST00000587099 1412 ntBASIC18.71■□□□□ 0.59
NGFRP08138 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.71■□□□□ 0.59
NGFRP08138 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
NGFRP08138 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFRP08138 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NGFRP08138 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NGFRP08138 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
NGFRP08138 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.7■□□□□ 0.58
NGFRP08138 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.7■□□□□ 0.58
NGFRP08138 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.7■□□□□ 0.58
NGFRP08138 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.7■□□□□ 0.58
NGFRP08138 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.7■□□□□ 0.58
NGFRP08138 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.7■□□□□ 0.58
NGFRP08138 CYP2T3P-201ENST00000601990 817 ntBASIC18.7■□□□□ 0.58
NGFRP08138 AL356652.1-201ENST00000615962 565 ntBASIC18.7■□□□□ 0.58
NGFRP08138 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
NGFRP08138 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NGFRP08138 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NGFRP08138 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.7■□□□□ 0.58
NGFRP08138 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NGFRP08138 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.7■□□□□ 0.58
NGFRP08138 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.7■□□□□ 0.58
NGFRP08138 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NGFRP08138 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
NGFRP08138 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
NGFRP08138 AC006970.2-201ENST00000450065 779 ntBASIC18.69■□□□□ 0.58
NGFRP08138 AF201337.1-201ENST00000520239 748 ntBASIC18.69■□□□□ 0.58
NGFRP08138 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.69■□□□□ 0.58
NGFRP08138 AL121603.2-201ENST00000557373 2117 ntBASIC18.69■□□□□ 0.58
NGFRP08138 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NGFRP08138 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.69■□□□□ 0.58
NGFRP08138 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.69■□□□□ 0.58
NGFRP08138 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NGFRP08138 PKD1P6-201ENST00000343738 4769 ntBASIC18.69■□□□□ 0.58
NGFRP08138 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NGFRP08138 AC020907.5-201ENST00000624372 1936 ntBASIC18.68■□□□□ 0.58
NGFRP08138 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
NGFRP08138 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.68■□□□□ 0.58
NGFRP08138 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 KRT18P68-201ENST00000392293 1000 ntBASIC18.68■□□□□ 0.58
NGFRP08138 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.68■□□□□ 0.58
NGFRP08138 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.68■□□□□ 0.58
NGFRP08138 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.68■□□□□ 0.58
NGFRP08138 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.68■□□□□ 0.58
NGFRP08138 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.68■□□□□ 0.58
NGFRP08138 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NGFRP08138 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFRP08138 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.68■□□□□ 0.58
NGFRP08138 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.68■□□□□ 0.58
NGFRP08138 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.67■□□□□ 0.58
NGFRP08138 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFRP08138 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFRP08138 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFRP08138 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NGFRP08138 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFRP08138 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFRP08138 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.67■□□□□ 0.58
NGFRP08138 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.67■□□□□ 0.58
NGFRP08138 NCF1B-203ENST00000435988 1254 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms